Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0936 ATGAATTTGCAAGCTGAATTAATTACCATTGGTATCACTGCTGGTTTGGCCCTCGGAATTCTGATCTCTTGCCTCGTATTTTTCGGCATAAGGTGGTATAAGAAGTGGTCTAATAGTACACGATCTGCAAGTGAGGGTACTTCAACAACTCTTCCAATACGAACAAATGGATTGGACACGAGCACCGACTTCAGTGCATCCATTACTAGTTCCATATCCATGTCAGAAAATGTTAAAAGTTATTCCCCTTTCAGCTGGTGGAGTTGTCAAAGCAAAGATCACTTCGCTTCACAATCGGGCATTCCTAAGTACTCATACAAAGAAATTCAAAGGGCCACACAAAATTTCACAACTACCTTGGGACAAGGATCATTTGGAACAGTTTATAAAGCAACAATGGCTACAGGGGAGGTAGTAGCCGTAAAGGTGCTTGCAACCGATTCCAAACAAGGGGAGAAAGAATTCCAAACAGAGGTGGTTCTGCTAGGAAGACTGCATCATCGGAATCTTGTGAATTTGGTTGGATATTGTGTAGATAAAGGACAGCGCATACTGGTTTATCAGTTCATGAGTAACGGGAGTTTAGGAAATCTTCTATATGGTGGAGAAAAGAAGTTGAGTTGGGATGAAAGGTTGCAAATTGCCCTTGATATTTCACATGGAATACAATACCTTCATGAAGGAGCTGTCCCACCCGTCATACATCGTGATCTGAAGTCGGCAAATATATTGCTAGATAACTCAATGAGAGCTAAGGTTGCTGATTTTGGGCTCTCAAAGGAAGAGGCCTTCGATGGCCAGAATTGTGGCCTTAAAGGTACATATGGCTACATCGATCCGGCATACGTTTCCACAAGCAAGTTAACGATGAAGAGCGATATCTACAGTTTCGGTATCATACTTTTTGAGCTCATCACTGCCATCCACCCACATCAAAATCTGTTGGAATATATTGGCCTTGCTGCAATGGATCACGATGGCATAGATGGGATACTTGACAAGCAACTTGTGGAAAACTGCGACATCGAAGAAGTTAGGCAGCTTGCTATAATTGCACATAAATGCTTGCACAAATCACCGAAGAAACGCCCTTCGATAGGCGAAGTTTCGCAGGTAATATTACGGATAAAGAATAGGCGACAGCACCGTCCCTTATCCAGAGGTTTGAGTCAATTAGAAGATCAAAATGATGAGTTAAGTAGGACAGCCTCTATGAACCACAAACAAAGTGGATGA 1236 0.4231 MNLQAELITIGITAGLALGILISCLVFFGIRWYKKWSNSTRSASEGTSTTLPIRTNGLDTSTDFSASITSSISMSENVKSYSPFSWWSCQSKDHFASQSGIPKYSYKEIQRATQNFTTTLGQGSFGTVYKATMATGEVVAVKVLATDSKQGEKEFQTEVVLLGRLHHRNLVNLVGYCVDKGQRILVYQFMSNGSLGNLLYGGEKKLSWDERLQIALDISHGIQYLHEGAVPPVIHRDLKSANILLDNSMRAKVADFGLSKEEAFDGQNCGLKGTYGYIDPAYVSTSKLTMKSDIYSFGIILFELITAIHPHQNLLEYIGLAAMDHDGIDGILDKQLVENCDIEEVRQLAIIAHKCLHKSPKKRPSIGEVSQVILRIKNRRQHRPLSRGLSQLEDQNDELSRTASMNHKQSG* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0936 411 MobiDBLite consensus disorder prediction 382 411 - -
Lan8g0936 411 ProSitePatterns Protein kinases ATP-binding region signature. 120 142 IPR017441 GO:0005524
Lan8g0936 411 PANTHER OS01G0750732 PROTEIN 9 407 - -
Lan8g0936 411 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 407 - -
Lan8g0936 411 CDD STKc_IRAK 120 376 - -
Lan8g0936 411 Gene3D Transferase(Phosphotransferase) domain 1 190 396 - -
Lan8g0936 411 SMART serkin_6 114 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0936 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Lan8g0936 411 ProSiteProfiles Protein kinase domain profile. 114 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0936 411 SUPERFAMILY Protein kinase-like (PK-like) 95 372 IPR011009 -
Lan8g0936 411 MobiDBLite consensus disorder prediction 388 411 - -
Lan8g0936 411 Gene3D Phosphorylase Kinase; domain 1 84 189 - -
Lan8g0936 411 Pfam Protein kinase domain 118 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0936 Lan-Chr8 11103643 11108251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0936 90 396 Receptor kinase-like Gene Family AT3G19300 41.325 1.57e-73 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lan8g0936 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0936 - - adu:107471361 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0936 8 11103643 11108251 Lan20g1330 20 19922843 19926876 LSH