Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0934 ATGAGATATGTCATCTCAGCTCTTTGTGTTCTTGTGCTATTCTCTTATGCTTGTGCTTATGATCCTTTGGATCCAACTGGAAACATAACAATCAAATGGGATGTCATGTCTTGGACAGCAGATGGTTATGTTGCTACGGTGACAATGTACAACTTCCAAATGTTTCGGCACATTATTCAGCCCGGGTGGACATTAGGATGGACATGGGCAAAGAAAGAAGTTATATGGTCAGTGGTAGGATCTCAAACCACAGAACAAGGGGATTGTTCCAAATTCAAAGGAAACATACCTCACTGCTGCAAGAAAACTCCTACAGTAGTAGACTTGCTTCCTGGTGTACCTTACAATCAGCAATTCACAAACTGCTGTAAGGGTGGAGTGGTTGCAGCATGGGGCCAAGATCCTTCACAAGCTATCTCATCTTTTCAATTGAGTGTTGGTCAAGCTGGTACATCGAACAAGACGGTTAAACTTCCGAAGAATTTCACTCTCTTGGCTCCGGGACCTGGCTATACTTGTGGCCCTGCAAAGATTGTTCCTTCCACCAATTTCCTCACACCTGACAAGCGCCGTAAGACTCAAGCATTAATGACATGGAATGTTACCTGCACTTACTCACAATTTCTGGCAAGAAAGAACCCAAGTTGTTGTGTATCATTATCATCCTTCTATAATGATACCATTACCCCTTGTCCCTCTTGTGCCTGTGGCTGCCAGAACAAGAAGAATTGTGTCAAGAGTGACTCAAAAATTCTCAGCATGGTAGGGGTTCACACTCCAAAGAAAGACAATGAACCAATGCTGCAGTGTACTCATCATATGTGCCCAATAAGGGTCCATTGGCATGTGAAACAAAACTATAAGGACTATTGGAGAGTGAAGATTGCCATAACAAATTTCAATTACAGAATGAATTACTCTCTTTGGGCTCTTGCTATTCAGCATCCAAATCTAAACAATGTCACTCAAGTCTTCAGCTTTGACTACAAGCCTTTGGTTCCTTATGAATCCATAAATGACACTGGTATCTTCTTTGGCATGAAATACTTCAATGATCTATTAATGGAAGCTGGACCAACTGGTAATGTTCAATCAGAAGTGCTTCTTCAGAAGAACATGGATACCTTCACATTCAAGCAAGGTTGGGCATTTCCTCACAAGGTCTACTTTAATGGTGATGAATGCATGTTGCCTCCACCAGATACCTACCCTTTTCTCCCTAATTCTGCACCTGCAAGGCTACTTGCATTACCAGCATTCATATTCTCTTTGCTTTTCTTCTTAGCAGTTTGGTGA 1296 0.419 MRYVISALCVLVLFSYACAYDPLDPTGNITIKWDVMSWTADGYVATVTMYNFQMFRHIIQPGWTLGWTWAKKEVIWSVVGSQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVAAWGQDPSQAISSFQLSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKIVPSTNFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNDTITPCPSCACGCQNKKNCVKSDSKILSMVGVHTPKKDNEPMLQCTHHMCPIRVHWHVKQNYKDYWRVKIAITNFNYRMNYSLWALAIQHPNLNNVTQVFSFDYKPLVPYESINDTGIFFGMKYFNDLLMEAGPTGNVQSEVLLQKNMDTFTFKQGWAFPHKVYFNGDECMLPPPDTYPFLPNSAPARLLALPAFIFSLLFFLAVW* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0934 431 PANTHER COBRA-LIKE PROTEIN 4 429 - -
Lan8g0934 431 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Lan8g0934 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Lan8g0934 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Lan8g0934 431 PANTHER PROTEIN COBRA 4 429 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0934 Lan-Chr8 11093995 11096510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0934 19 430 COBRA Gene Family AT3G29810 67.470 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0934 - - gmx:100798678 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0934 8 11093995 11096510 Lan20g1328 20 19906044 19909980 LSH
Lan9g0114 9 1367996 1372147 Lan8g0934 8 11093995 11096510 PCT