Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0928 ATGTCCTCATCTTCAACCAACTCCTTCGGTCAAACTGAGATCAACTGGGACAAGCTAGACAAAACAAAGTTCTATGGCGTGGGAGCTGGACTCTTTACGGGTATTACAGTGGCTCTCTATCCAGTTTCCGTTGTGAAAACTAGGTTGCAGGTTGCTTCAAGGGATACCGTAGAGAGAAATGCATTTTCTGTCGTGAAAGGTTTACTTAAAACGGATGGCATCCCTGGTTTGTACAAAGGGTTTGGAACGGTTATCACTGGTGCAGTTCCTGCTAGGATCATATTCCTCACAGCCTTGGAGACCACGAAGGTGGCTGCCTTCAGGATGCTTGAGCCATTTAAACTATCTGAGACTAGCCAGGCTGCCTTAGCAAATGGAATTGCAGGCATGACATCGTCACTTTTTGCACAATCTGTGTTTGTTCCGATTGATGTGGTCAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATACCCAGTATAGTGGTGGTCTGGATGTTGCTCGTAAGGTGATAAAATCTGATGGCATCAGGGGATTATATCGAGGGTTTGGTCTATCTGTTATGACTTATTCGCCTTCTAGTGCTGTATGGTGGGCAAGTTATGGTTCAAGCCAACGCTTCATATGGAGATACTTGGGAAATGGTAAGGAAGGTACTCCTAGTGTGCAGAACATTATGTTAGTTCAGGCTGGTGGGGGGATTATTGCTGGCGCAACTGCATCCTGCATTACAACCCCGTTGGATACTATCAAGACACGGTTACAGGTGATGGGACACGAAAAGAGAAGCTCCGTAAAACAAGTTGTTAAAGACTTAATCAAAGAGGATGGTTGGAAAGGTTTATACAGAGGGTTAGGTCCAAGATTTTTTAGCATGTCAGCATGGGGTACTTCAATGATATTGGCTTATGAATATCTTAAGCGCTTGTGTGCCAAAGATGAATAA 948 0.4462 MSSSSTNSFGQTEINWDKLDKTKFYGVGAGLFTGITVALYPVSVVKTRLQVASRDTVERNAFSVVKGLLKTDGIPGLYKGFGTVITGAVPARIIFLTALETTKVAAFRMLEPFKLSETSQAALANGIAGMTSSLFAQSVFVPIDVVSQKLMVQGYSGHTQYSGGLDVARKVIKSDGIRGLYRGFGLSVMTYSPSSAVWWASYGSSQRFIWRYLGNGKEGTPSVQNIMLVQAGGGIIAGATASCITTPLDTIKTRLQVMGHEKRSSVKQVVKDLIKEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDE* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0928 315 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 11 315 - -
Lan8g0928 315 Gene3D Mitochondrial carrier domain 24 315 IPR023395 -
Lan8g0928 315 PRINTS Mitochondrial carrier protein signature 37 51 IPR002067 GO:0055085
Lan8g0928 315 PRINTS Mitochondrial carrier protein signature 181 199 IPR002067 GO:0055085
Lan8g0928 315 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Lan8g0928 315 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 11 315 - -
Lan8g0928 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 105 IPR018108 -
Lan8g0928 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 120 208 IPR018108 -
Lan8g0928 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 310 IPR018108 -
Lan8g0928 315 SUPERFAMILY Mitochondrial carrier 17 307 IPR023395 -
Lan8g0928 315 Pfam Mitochondrial carrier protein 26 104 IPR018108 -
Lan8g0928 315 Pfam Mitochondrial carrier protein 122 211 IPR018108 -
Lan8g0928 315 Pfam Mitochondrial carrier protein 233 314 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0928 Lan-Chr8 11007033 11011979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0928 14 315 Chloroplast and Mitochondria Gene Families AT5G15640 77.199 3.29e-174 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0928 K15121 - gmx:100781796 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0928 8 11007033 11011979 Lan9g0116 9 1398709 1405836 PCT
Lan9g0116 9 1398709 1405836 Lan8g0928 8 11007033 11011979 PCT