Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0923 ATGGTATCAAACAGTGGAGTTTCATGGTTCAAGTTGGAAGAGAAGTTTGAAACCAAAATTCTACAGTGGGAAAGCATCAATGACACAAATAATATGACTAACACTCCAAAAGAAGCAGATTTTGCATTGAAAGAGGAAGGTCTAATTACAAGTGATCATGAAAAAGCAAAAGCTTCTGCCTCATCACAATGGTTAAGATTGAAAGATTCGAGGATCGTTCGTGTATCTCGCGCCTTCGGAGGTAAAGACAGGCATAGCAAGGTGTGCACAATAAGAGGACTAAGAGATAGGAGGGTGAGGCTTTCAGTCCCCACTGCCATTTACCTATATGATCTCCAACATAGGCTAGGGCTCAATCAACCTAGCAAGGTTTTTGATTGGTTGCTTAATGCAGCTAAGCATGAAATTGATGAACTCCCACCACTACCGATCCCTCCAGGGAACTTCACCCTCGGTTATCCATCTCTCGCTACTTCAAACGAAGTTACCAACTCCCGAAACAATACAAGTCAACTCAGTGCATCAGACTCTCACCTGATTAGTACTCGGGAGGATCATGAACAAGGAGGTGGCGATCGTGCTGGTGTACATGTTTCGCCGAATAATCTCTTATTACCAAGAGCAAACCATCCTTCATTCCTTGGCGTGCTGAACACTATGCCACTTGGTGGTTACCAATGGGAGCCTTCAAGTGATGTTGCTCAATTGGGAAACCATGGATTTGTACCATTTCCATCAACATTGTCTTTATCAAATGGGAATAGTTCTTCTCAAATTTTGGTATGTCCTCATAGAGCAACTACACAATCATATTTCCCAGCTTCACAAATCAATCACTTTCAAATGCTGAGTTCAAGTTCTCATCAAAATCATCACTTGATGAATAATTCTCTCAATCCATCTCAACATTCTACTCCCAAACTTTTCCATTCATCTAACAGTAGTGAGAGCCAATCACATAAAGACCATGATTTTCCTTCAGAATGA 987 0.4134 MVSNSGVSWFKLEEKFETKILQWESINDTNNMTNTPKEADFALKEEGLITSDHEKAKASASSQWLRLKDSRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIYLYDLQHRLGLNQPSKVFDWLLNAAKHEIDELPPLPIPPGNFTLGYPSLATSNEVTNSRNNTSQLSASDSHLISTREDHEQGGGDRAGVHVSPNNLLLPRANHPSFLGVLNTMPLGGYQWEPSSDVAQLGNHGFVPFPSTLSLSNGNSSSQILVCPHRATTQSYFPASQINHFQMLSSSSHQNHHLMNNSLNPSQHSTPKLFHSSNSSESQSHKDHDFPSE* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0923 328 Pfam TCP family transcription factor 81 184 IPR017887 -
Lan8g0923 328 MobiDBLite consensus disorder prediction 160 193 - -
Lan8g0923 328 MobiDBLite consensus disorder prediction 286 315 - -
Lan8g0923 328 ProSiteProfiles TCP domain profile. 81 139 IPR017887 -
Lan8g0923 328 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 32 323 IPR005333 GO:0003700
Lan8g0923 328 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 32 323 - -
Lan8g0923 328 MobiDBLite consensus disorder prediction 286 328 - -
Lan8g0923 328 MobiDBLite consensus disorder prediction 160 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0923 Lan-Chr8 10967675 10969249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0923 64 282 TCP Transcription Factor Family AT3G02150 42.105 3.28e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan8g0923 TCP 6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0923 - - gmx:100803100 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0923 8 10967675 10969249 Lan20g1310 20 19647396 19649266 LSH