Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0904 ATGGCAAGATCCTTAGGTGTGAGAAAAGGAGCATGGAGTCATTTGGAAGATGAACTTCTTAGGAAATGTGTGCAACAATATGGGGAAGGAAAATGGCACTTAGTTCCTAAAAGAGCAGGCTTGAATAGATGCCGCAAAAGCTGCAGACTTCGATGGTTTAATTATCTAAATCCAAAAATTAAGCGTGGAGAGTTTGGTGAGGATGAAGTTGATTTGATGTTAAGATTACACAGACTTTTGGGAAACAGATGGTCCCTTATTGCTGGAAGACTTCCCGGAAGAACTCCTAATGATGTTAAAAACTATTGGAATTCCTATATTCGTAAGAAAGAATCCTCTCATCATCATAAGGAAAATATAAATTCAAGGCCAAAGGAAATAATCATGGAACCTCATGTTGTGATAAAACCCAAGCCTCAAACTCTTTCAACAACTAGGTCATGTTTGAAAGGGAAATTCATTAGGGAAGATCAAAGTGGAATCAAACAATGCTCTACTAATCAATCATGTGATGCAGCTTCTTCCGAATGCAATAATAATTATTCAGATAAATGGTGGGAAAATATGTTGGAAGATATGAGAAACAATGAAGTGAACAACATGGGTGAACATGGAAGTGGTGACTTTGTTTTAGATGATCAAAGTTGGGAAGATGTTCTTGTTGATATTAATTGGTGGGATTCATGA 687 0.3683 MARSLGVRKGAWSHLEDELLRKCVQQYGEGKWHLVPKRAGLNRCRKSCRLRWFNYLNPKIKRGEFGEDEVDLMLRLHRLLGNRWSLIAGRLPGRTPNDVKNYWNSYIRKKESSHHHKENINSRPKEIIMEPHVVIKPKPQTLSTTRSCLKGKFIREDQSGIKQCSTNQSCDAASSECNNNYSDKWWENMLEDMRNNEVNNMGEHGSGDFVLDDQSWEDVLVDINWWDS* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0904 228 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Lan8g0904 228 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Lan8g0904 228 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 6 172 - -
Lan8g0904 228 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Lan8g0904 228 CDD SANT 64 107 IPR001005 -
Lan8g0904 228 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Lan8g0904 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 111 IPR017930 -
Lan8g0904 228 CDD SANT 11 56 IPR001005 -
Lan8g0904 228 Gene3D - 63 123 - -
Lan8g0904 228 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Lan8g0904 228 Gene3D - 9 61 - -
Lan8g0904 228 SMART sant 61 109 IPR001005 -
Lan8g0904 228 SMART sant 8 58 IPR001005 -
Lan8g0904 228 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 172 - -
Lan8g0904 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 60 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0904 Lan-Chr8 10775022 10777576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0904 6 191 MYB Transcription Factor Family AT1G66370 48.780 4.34e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan8g0904 Myb_DNA-binding 4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0904 - K09422 lang:109335100 301.212