Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0900 ATGTCAGAGATTTCAAGTCTTTGTGGTATAAATATAGAAGATAAGAGAGTTCCTTCAATTTTCTCTGAAGAAAATTGCATAACTCAAATGGATGCAAAGGAAGATAAACTCAAATCTACCAAAGCTGAAATGGGAGAGGTGAAAGAAGAAAATGAAAGATTGAAGATGATGCTAGAGAATGTTGAAAAGGATTACCACTCTCTTAAACTTCTTTTCTTTGATATTCTTAATAGAGAAGCACCCAACAAAGGTGTAGAAGATTCATATACTTCTCCTAATGAAGTAGAAGAACCTAAGTTTGTGTCACTTTGTCTTGGAAGAACCCCAAAGGAGCCTAAAAAAGAAGACAAAACTAGTAACTCTAGTAAACCTAAAGAAAATGAAGATTTGGAAGACAACCTTAAACTTGGTTTGGAGCTTGTTTCTGATCATAGTCCTATGAACAACTCAGAAGAAGTAAAGAAAGCAGAAAGAGGAGGAACATGTTCAAGAAATATATTAGTAAGGACCAAAGATAGTGTTGATGAAATTTTGGAACAAATTCCTACAAAAAGAGCTAGAGTTTGTGTGAGAGCTAGATGTGATACTCCCACGATGCATGATGGTTGCCAATGGAGGAAATATGGACAGAAGATATCAAAAGGAAATCCATGTCCAAGGGCATACTATCGTTGCACTGTTGCTGCAGCATGTCCTGTCAGGAAACAGGTACAAAGATGTGCTGAGGATATGTCAATTTTAATCACTACATATGAAGGAAGCCACAACCATCCACTTCCTGTTTCAGCCACAGCCATGGCTTCAACAACCTCTGCTGCTGCTTCCATGCTATTGTCAGGTTCTTCAACATCTCAGCCCGAAAATCGTCACAATTCCGCGCCTTTCGGAAATGCTCCTACACTACTCAATGGTCTAAATTTCAGTCATTTTGATCAACCAAGTGTAAAACAAGCCTTCTTACCAAACCCTGCCTCACAGAATTTGTTCCCAACAATCACTCTAGACCTCACTTCATCCTCCAAAACAACTAATTTCAATCGTTTATCTTCGACCTACACTTCGACGCCGAGATTTCATCCTTTAAGTCTAAGTTTCTGCCCTCCAGAACCCAACATTATACCATCATTTTGGGGTAAGGGAGTCCCTAATATAGGCACAATGACAGTTAACAAAACCCACATTAGGCCAGTCAATATTGGAAACCAATTTCAAGAACATATCTATCATAACTGCATCAAGAACCAAACTCCTTTCAATGAGGCTTTGGCAGAAACACTCACCAAAGCAATTAGTACCGATCCGAGTCTTCGTTCCGCGATAGCAGCCGCAGTTTCATCGATAGGCAGGCAAGGATCAATCAATGCTAAGCAAGTAGGAGAAGAGATTCTAGGTTCAGGTTTGAGCTTGAGACTTGGGGAGCATCCTCAATATCCTTCTTCCAATCACTTGAACCAAAATGGAAAAGGATGCTTAGCAGGCTATTTCAACAGATCATCATCGTCACCATCATCATCGAGTTCCAAGGTTGGAAATTTCATGCTTCTCCAACCTCCACAACCATTTTCTATATCCAAGAGAAGCACACTTCCTTCCAATGTTGATCCCATCAACCATTGGATTCCGGAAATAGGCCATATGTACTCCAAAACTACCTTGTAG 1659 0.3984 MSEISSLCGINIEDKRVPSIFSEENCITQMDAKEDKLKSTKAEMGEVKEENERLKMMLENVEKDYHSLKLLFFDILNREAPNKGVEDSYTSPNEVEEPKFVSLCLGRTPKEPKKEDKTSNSSKPKENEDLEDNLKLGLELVSDHSPMNNSEEVKKAERGGTCSRNILVRTKDSVDEILEQIPTKRARVCVRARCDTPTMHDGCQWRKYGQKISKGNPCPRAYYRCTVAAACPVRKQVQRCAEDMSILITTYEGSHNHPLPVSATAMASTTSAAASMLLSGSSTSQPENRHNSAPFGNAPTLLNGLNFSHFDQPSVKQAFLPNPASQNLFPTITLDLTSSSKTTNFNRLSSTYTSTPRFHPLSLSFCPPEPNIIPSFWGKGVPNIGTMTVNKTHIRPVNIGNQFQEHIYHNCIKNQTPFNEALAETLTKAISTDPSLRSAIAAAVSSIGRQGSINAKQVGEEILGSGLSLRLGEHPQYPSSNHLNQNGKGCLAGYFNRSSSSPSSSSSKVGNFMLLQPPQPFSISKRSTLPSNVDPINHWIPEIGHMYSKTTL* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0900 552 Pfam WRKY DNA -binding domain 201 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan8g0900 552 PANTHER WRKY TRANSCRIPTION FACTOR 72-RELATED 35 531 - -
Lan8g0900 552 SUPERFAMILY WRKY DNA-binding domain 192 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan8g0900 552 MobiDBLite consensus disorder prediction 108 129 - -
Lan8g0900 552 Coils Coil 30 71 - -
Lan8g0900 552 ProSiteProfiles WRKY domain profile. 194 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan8g0900 552 SMART WRKY_cls 199 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan8g0900 552 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 35 531 IPR044810 GO:0003700
Lan8g0900 552 MobiDBLite consensus disorder prediction 100 129 - -
Lan8g0900 552 Gene3D WRKY domain 184 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0900 Lan-Chr8 10700638 10704573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0900 44 525 WRKY Transcription Factor Family AT5G15130 39.372 5.36e-85 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan8g0900 WRKY 3.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0900 - - lang:109353541 1090.49