Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0898 ATGTACGGCTTCGAAGCTATGAATTTCAACATCCACGGCGGTTACCTGGAGGCAATCGTCCGTGGCCACCGTGCCGGACTTCTCACCACCGCCGATTACAACAACCTCTGTCAATGTGAATCCCTCGATGACATCAAGATGCACCTCTCCGCCACCGATTACGGTTCTTACCTCCAAAACGAACCTTCTCCGTTGCATACAACTACAATTGTGGAGAAATGTACACTTAAGCTTGTTGATGATTACAAGCATATGTTGTGCCAAGCCACTGAACCTTTATCAACCTTTCTAGAATACATCACATATGGTCACATGATAGACAATGTTGTTTTGATTGTTACTGGAACCTTGCATGAGAGGGATGTCCAAGAACTGCTAGAAAAATGCCATCCACTGGGCATGTTTGACAGTATTGCTACACTGGCAGTTGCTCAGAATATGCGGGAGCTTTACAGGCTGGTACTTGTTGACACTCCTCTCGCTCAATACTTCTCTGAGTGCATTACAACAGAGGACTTAGATGACATGGACATAGAAATAATGAGGAATACTCTTTACAAGGCATACCTTGAAGACTTTAACAGATTTTGTCAGAAACTTGGTGGTGCCACTGCTGAAATCATGTCTGACCTTCTAGCTTTTGAGGCTGATAGAAGGGCTGTGAATATTACCATAAATAGCATTGGTACTGAGCTCACTAGAGATGATCGTAGAAAGTTGTACTCTAATTTCGGTTTACTTTATCCCTATGGACATGAGGAACTTGCTGTTTGTGAGGACATTGATCAGGTCCGCGCTGCTATGGAAAAATACCCCCCATACCAGTCTATTTTTGCTAAGTTATCCTACGGGGAGAGCCAGATGCTTGACAAGGCATTCTATGAAGAGGAGGTGAAGAGGCTTTGCTTGGCCTTTGAGCAACAGTTCCATTATGCCGTGTTCTTCGCATACATGAGGCTAAGGGAGCAGGAGATCAGGAACCTAATGTGGATTTCGGAATGTGTGGCTCAGAACCAGAAGTCCAGAGTTCATGACAGTGTAGTTCTCATATTTTAA 1056 0.4422 MYGFEAMNFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCESLDDIKMHLSATDYGSYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAQYFSECITTEDLDDMDIEIMRNTLYKAYLEDFNRFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAVCEDIDQVRAAMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVLIF* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0898 351 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 335 IPR044911 -
Lan8g0898 351 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 351 IPR016727 GO:0033179|GO:0046961|GO:1902600
Lan8g0898 351 PANTHER V-TYPE PROTON ATPASE SUBUNIT 1 351 - -
Lan8g0898 351 Gene3D - 206 309 IPR035067 -
Lan8g0898 351 PIRSF V-ATP_synth_D 4 350 IPR016727 GO:0033179|GO:0046961|GO:1902600
Lan8g0898 351 SUPERFAMILY V-type ATP synthase subunit C 14 348 IPR036079 -
Lan8g0898 351 Pfam ATP synthase (C/AC39) subunit 16 344 IPR002843 GO:0046961
Lan8g0898 351 Gene3D - 91 195 IPR035067 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0898 Lan-Chr8 10677588 10681314 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0898 1 351 Primary Pumps ATPases(2) AT3G28710 92.877 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0898 K02146 - gmx:100800553 688.723