Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0872 ATGGCAAGTGGTGGAACAGAAGCTTTTCCTGATTTGGGTAAACATTGTCAACACCAAGATTGCACCCTCCTTGATTTTCTTCCTTTTACATGCCATGGCTGCAAAAAGGTATTTTGCTTAGAACATAGATCCTACAAGTCCCACACATGCCCAAAATCTGACCACAACAGCAGAAAGGTAATTGTTTGCCAAACATGTTCTATGTCCATTGAGGAGACCATAGGCTACATAGGACAAGAAGAGGAAGCAGCTATCTTGAAGAAGCACCAAAAATCTGGAAAATGTGACCCCAACAAGAAGAAGAAACCGATGTGTCCGGTTAAGCGCTGCAAAGAGATTCTAACATTCTCTAATACAAGTACTTGTAAAACTTGCAGCATCAAAGTGTGCCTCAAACACCGTTTCCCTGCTGATCATGATTGTGGCAGAGTCACTTCATCTTCTTTATCATCTGCTGGTGCTGGTGCTAATGGGCAATGGAAAAATAGATTCTTGGCTGCTCTGGCTTCAAGGAATGGCCAAGACTGTGGCAAGAGTAAAGGGCATAATTCATCTTCTGCTAGTAATCCTTCTGTTAAGGCCTACTGA 588 0.4269 MASGGTEAFPDLGKHCQHQDCTLLDFLPFTCHGCKKVFCLEHRSYKSHTCPKSDHNSRKVIVCQTCSMSIEETIGYIGQEEEAAILKKHQKSGKCDPNKKKKPMCPVKRCKEILTFSNTSTCKTCSIKVCLKHRFPADHDCGRVTSSSLSSAGAGANGQWKNRFLAALASRNGQDCGKSKGHNSSSASNPSVKAY* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0872 195 MobiDBLite consensus disorder prediction 175 195 - -
Lan8g0872 195 Pfam AN1-like Zinc finger 105 143 IPR000058 GO:0008270
Lan8g0872 195 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Lan8g0872 195 SUPERFAMILY AN1-like Zinc finger 9 61 IPR035896 -
Lan8g0872 195 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 6 171 - -
Lan8g0872 195 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Lan8g0872 195 SMART AN1_Zf_4 105 146 IPR000058 GO:0008270
Lan8g0872 195 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 6 171 - -
Lan8g0872 195 Gene3D - 80 157 IPR035896 -
Lan8g0872 195 MobiDBLite consensus disorder prediction 176 195 - -
Lan8g0872 195 Gene3D - 2 65 IPR035896 -
Lan8g0872 195 SUPERFAMILY AN1-like Zinc finger 96 144 IPR035896 -
Lan8g0872 195 ProSiteProfiles Zinc finger AN1-type profile. 99 149 IPR000058 GO:0008270
Lan8g0872 195 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0872 Lan-Chr8 10478976 10480533 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0872 1 176 C2H2 Transcription Factor Family AT3G28210 62.360 4.91e-77 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0872 - - aprc:113867149 309.686