Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0865 ATGCATGGGTTCGCTCGTGAACACAGCAAACAGAGGCGGCACATGTGGCCTCTACCTTCTAACGCGACCACTGTAGTCACCGATTCTCAATTTTTATGCAAAGATGGACGTAAGATTCGAGTTGGTGATTGTGCACTTTTCAAGCCACCCCATGATTCCCCTCCTTTTATTGGAATAATTCGTAGGTTAACGTTTGATAAAGAAGAAAATCCAAGTTTAGAAGTGAGTTGGCTTTACCGACCTGCTGATTTGAAGCTTGCTAAAGGGATTTTCCTGGAAGCTGCTCCAAACGAGGTCTTCTACTCCTTTCACAAGGATGAAATATCTGCTGCATCATTACTCCATCCGTGTAAAGTTGCATTCCTTCGTAAAGGTGTTGAACTTCCTTCAAGGATATCTGCATTTGTCTGTAGACGGGTGTACGACATTGAGCACAACTGTCTATGGTGGCTAACTGATCAGAACTACCTTAATGAAGAAATTAACCAGCTATTAGAGAAGACAAAACTAGATATGCATGGTGCAGTACAGTCTGGAGGCCGTTCGCCCAAACAGTTGAATGGTCCAACATCAACGCAATCATTGAAGTCTGGTTCTGATAGCATTAAAAATAGCTCTTTTGGTGTACAGAGTAAGGGGAAAAAGAGAGAACGGGGTGACCAGGGATCTGATTCATCTAAAAGGGAGCGATTAGTTAAAGCAGAAGAGGGAGATTCTGGTCAATCTAGACCGGAGAGCATGTTAAAATCTGAGGTTTCTAAATTTACTGATAAAGGTGGGCTAGTGGACTTTGAAGGAGTTGAAAAACTGGTACAGCTCATGCAACCTGAAAGTGGTGATAAAAAAATAGATTTGTCTGGGAGAATAATGCTGGCCAATGTAATAGCAGTTACCGACCGGTATGACTGTCTTAGCTGGTTTGTACAGCTCAAGGGTTTGCCTGTGTTGGATGAATGGCTCCAGGAGGTTCATAAGGGCAAAATTGGTGATGGTAATATGCCTAAAGAAACTGACAAGTCTGTTGAGGATTTTTTGTTGGCACTACTTCGTGCATTGGATAAGCTTCCTGTGAATCTTAATGCACTACAGACCTGTAATGTTGGAAAGTCTGTTAATCATTTACGCTCTCACAAAAATGCTGAAATTCAGAGGAAAGCTAGGAGTTTAGTTGACACATGGAAGAAACGCGTGGAGGCTGAAATGAAGATGACTGATTCACAATCTGGTTCAACCCACCGTGTTTCTTGGCCAGCAAAGCAAGCATCTTCTGAGGTTTCTCAGGTTGGAAATCGAAAAATTGGAGGATCTTCCGAGAATGTTGCAAAGAGCTCTGCAATTCAACCCTCAGTATCTAAAACTCCCCAGGCAAAGCCTAATTCTGGAGAACTATTGTCCAAGTCCTCTTCGACTCCTGGCTCTGTTAAAGGCATGAGTACCTCAGTAGGCAGTAACTCAAAAGATCGAAACATGAAAGTGTTGGTTGGAGCTGTCACGTCAGATCTACCAATGACACCTATCAAGGAGGAAAGGAGTAGTGGTTCTAGTCAGTCTCAAACCAACAGCTTATCTTGTTCTAGCGAACATGCAAAAACTGTTGGTTCTTGTATGGAAGATGCAAGGAGTTCCACTGCTGCGTCAATGAGTGCTGGTAAAATACATGGTGGTGCATCTCGAAATCGGAAGTCAAGCAATGGTCTACATGGAGTTGGTCTTGCTGTACTTCAGAAGGAGTCCAGGTCTGCAAAAACTTTAACTAGAAATACTCTGGTTGAAAAAGTCTCACCAACTCAAATGTCCCACGAAAAATCACCTGATCGGCCCCTTGCTGATCAACGGAATAGTCAGCCACTGATTCTCAGGTTGCCAAACACTGGTCGAAGTCCTTCAAGGGGAGCTAGTGGGGGCACTTTTGAAGAACCTACTGTTTCATGTGGCAAAGCTTCACCACCTGCTGAAAAGAATCAGAGTCCGGATAGAAGAGCGAAAGCTAAAACTGATTGTTCGCCGACCAATGTTGCATCAAATTTCAGAAATGATGCATCTGATGCTAATGGATCTTTGACTTGTTTTGAGGAAGGTAAGGGGTCTCCGATTGGTGATCAGCAGTGCATTGCCAGTGAAGAGGGTGATAAACCAACTGAAACATCAAAACCAACTGGTCTTTCATCGGGATTTGTTTCTAGATCAGGGCAGATTTATGATGCATCCGTAAGTCCCATGGATGCATTAGTTGAAAGCTGTGTGAAAATTTCGGAAGCAAGTGCTTCTACTTCCCCTGGCGATGATGGGATGAACCTACTTGCTACTGTAGCTGCAGGGGAAATATCTAGATCCAAAAATGTTTCACCACTAGCTTCACCTGCAAGGAAGTCTCCTGAAGCTGGAGGGTCTAGCTCTGTCAATGATTGCAAGTCAAAACATTCTGGTGGAGGAGTTGTTCATACTCTTGCACAGTCTGATGTGGGGGCTATTGAAGAGCATCATTTGGAGTCTGTTGACCCATTGCAAGTCAAGCTTGATTCAAGGCATTCTGATATAATGGTGTTACACAATGGTTCTGAAGATGGTGAAGCCATGTCATCCAGTTGTGTTGAAAAAACTGGTGATGGCAGAACTAAAATGAATTTCTCCACTACAGATTGCTTGCAGAATGCTGAAGACCCTTGCTTACTGCCTGAAACCAAAGAGGGTGCTTCTGAAACTACATTGCCAGCAATAGAGGAGACTGATGTGGAGCCTGGAGGAACAAACCATTTAAATGACCAGAGGGAATTGGGATGTCAATGCGCTACAGGCAGTAGTTCAGACTCTAAATTAAAATCAAGAAGTTCCTCTTTTGGTGAAGATGTCAAGGTTGATCATCTGGATGAGAGAGTTACAGAGAATGAGAAAATGTCAGTTTCAAAGGAAGTCCTAGCAAGTGTAAATGTCGACAAGAAAATAGAGGAAAAATTGTCTGAGTTATCATCAGATGTTGGCAATGAGAACCGGATTATTGCAGAGAAAGTGTCAGGTACTGGCATATCAGTGCAAAAGCCCTCTCCTGTTGCACAAAACTGTGATCCCAATGATTTGAAGGAGGATGGTATGCTTCCTACTCCTGCTGGTAATGCCTCAATTGTATGCAGGGATGAAAATGCCGATGATGTGAGGTCAGGTGAGGTTGAGCCTGACACTAAACCAATGGATCTGGACCCAGCAGTTTCAGCTGGTATTAATGGACATGTTGAAGAGAATCTGGGTACAAATGAGGTTCTTGGTCACTGTTCTGAGTTATCAGGTCATCCTGAATTGCCAACAATTCATGGAAAAGAGAATGAAGTCTGCAAAACATCAGAGTGTAACTTAGATGGAATTGAATCTGAGGCTGTGCTAGAACGGCATGCATTCAGTATTAATCCACCCCGTACAGATTCTGGGTCTGATACTGCAGTTAAACTGGACTTTGATTTAAACGAGGGGATTCCTGTAGATGATGTAAGCCAGGGGGAGATTGTTAAACAGGAAGAACCTACTACTTCATCTGCTGTTCATGTTCCTTGTGCATTGCCCTTTCCTATGTCTTCCATGTCTGGGAGCTTGTATGCTTCAATTACAGCGACATCTGCTGCCAAGGGACCTGTTGTTCCACCAGAAAGCCCAATGCGGAATAAGGGGGAACTTGGATGGAAGGGATCGGCAGCTACAAGTGCATTTCGACCTGCTGAACCTAGGAAAAATGCAGAAGTGCCATCAAATACCACTGATATTCCTTCTGTTGATGCTACTCCAGTCAAACAAGCTCGCCCTCTTTTAGATTTTGATTTAAATGTGGCAGATGAACTCAGTTTTGACGATTTAACTTCTCATGGTTCTTTAGAATTTAGGCCACATGACCATAGCACAGTGGGTTTTGATCTTGATTTAAACAGAGTTGATGAGACCCCAGAAGCTGGGTCTTACTCTATGAGCAAAGTGGACATTCCTTCTTTACCAAGTAAGCTTTCATTGTCAAGTGGGATATCTAATGGTGGAAGTGTCTCAAGAGACTTTGATTTAAATAATGGACCGGGCCTTGATGAAGTGGGCACAGAAGTCACAGCTCGTAGTCAGCATATGAAAAGTACCATACCATTTCCTTCTGCTGTTCATGGCGCAAGAACAAATAATCCTGAATTCGGTAATTATTCTTGGTTTCCTCCATGCAATTCTTATTCTGCAATTACTGTCCCGCCCCTTCTGCCTGGCAGAGGGGAACAGAGTTATGTTGCCAGTGCTGGTGCACAGCGGATCATGGTTCCTACAGGTAGCACACCATTTGGTAATGAATTCTACAGAGGGCCAGTGCTTTCATCCTCGCCTGCTGTTGCTTATCCACCTAATACGCCCTTTCCGTATCCAGGATTTCCATTTGAAACCAATTTCCCATTATCTTCCAACTCCTTTTCTGGTTGTTCAACAGCATTCATGGATTCATCAACGATGGGTGGACTTTGCTTCCCTACCATGCCTTCGCAGCCTATTGGGCCGGGTGGTGTTGTCTCATCCACATATCCCCGTCCGTACGTGATGAGTCTCCCAGGTGGTACAAGTAATGTGATTCCTGACAACAGAAAATGGGGAAGTCAAAGTCTGGATCTTAATTCAGGCCCTGGCAGTGGTGCGGATGCAGAGGGGAGAGATGATAGATTGCCTTCTGGATTGAGGCAAATGCCTGCCCCCAGTTCACAGGCTTTGACAGAGGAACACATGAAGATGTTTCAGGCGGCAGGTGTATTGAAAAGAAAGGAACCTGATGGTGGTTGGGATGGAACTGATAGATTTAGCTACAAACAACCCTCATGGCAGTAG 4830 0.44 MHGFAREHSKQRRHMWPLPSNATTVVTDSQFLCKDGRKIRVGDCALFKPPHDSPPFIGIIRRLTFDKEENPSLEVSWLYRPADLKLAKGIFLEAAPNEVFYSFHKDEISAASLLHPCKVAFLRKGVELPSRISAFVCRRVYDIEHNCLWWLTDQNYLNEEINQLLEKTKLDMHGAVQSGGRSPKQLNGPTSTQSLKSGSDSIKNSSFGVQSKGKKRERGDQGSDSSKRERLVKAEEGDSGQSRPESMLKSEVSKFTDKGGLVDFEGVEKLVQLMQPESGDKKIDLSGRIMLANVIAVTDRYDCLSWFVQLKGLPVLDEWLQEVHKGKIGDGNMPKETDKSVEDFLLALLRALDKLPVNLNALQTCNVGKSVNHLRSHKNAEIQRKARSLVDTWKKRVEAEMKMTDSQSGSTHRVSWPAKQASSEVSQVGNRKIGGSSENVAKSSAIQPSVSKTPQAKPNSGELLSKSSSTPGSVKGMSTSVGSNSKDRNMKVLVGAVTSDLPMTPIKEERSSGSSQSQTNSLSCSSEHAKTVGSCMEDARSSTAASMSAGKIHGGASRNRKSSNGLHGVGLAVLQKESRSAKTLTRNTLVEKVSPTQMSHEKSPDRPLADQRNSQPLILRLPNTGRSPSRGASGGTFEEPTVSCGKASPPAEKNQSPDRRAKAKTDCSPTNVASNFRNDASDANGSLTCFEEGKGSPIGDQQCIASEEGDKPTETSKPTGLSSGFVSRSGQIYDASVSPMDALVESCVKISEASASTSPGDDGMNLLATVAAGEISRSKNVSPLASPARKSPEAGGSSSVNDCKSKHSGGGVVHTLAQSDVGAIEEHHLESVDPLQVKLDSRHSDIMVLHNGSEDGEAMSSSCVEKTGDGRTKMNFSTTDCLQNAEDPCLLPETKEGASETTLPAIEETDVEPGGTNHLNDQRELGCQCATGSSSDSKLKSRSSSFGEDVKVDHLDERVTENEKMSVSKEVLASVNVDKKIEEKLSELSSDVGNENRIIAEKVSGTGISVQKPSPVAQNCDPNDLKEDGMLPTPAGNASIVCRDENADDVRSGEVEPDTKPMDLDPAVSAGINGHVEENLGTNEVLGHCSELSGHPELPTIHGKENEVCKTSECNLDGIESEAVLERHAFSINPPRTDSGSDTAVKLDFDLNEGIPVDDVSQGEIVKQEEPTTSSAVHVPCALPFPMSSMSGSLYASITATSAAKGPVVPPESPMRNKGELGWKGSAATSAFRPAEPRKNAEVPSNTTDIPSVDATPVKQARPLLDFDLNVADELSFDDLTSHGSLEFRPHDHSTVGFDLDLNRVDETPEAGSYSMSKVDIPSLPSKLSLSSGISNGGSVSRDFDLNNGPGLDEVGTEVTARSQHMKSTIPFPSAVHGARTNNPEFGNYSWFPPCNSYSAITVPPLLPGRGEQSYVASAGAQRIMVPTGSTPFGNEFYRGPVLSSSPAVAYPPNTPFPYPGFPFETNFPLSSNSFSGCSTAFMDSSTMGGLCFPTMPSQPIGPGGVVSSTYPRPYVMSLPGGTSNVIPDNRKWGSQSLDLNSGPGSGADAEGRDDRLPSGLRQMPAPSSQALTEEHMKMFQAAGVLKRKEPDGGWDGTDRFSYKQPSWQ* 1610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0865 1609 MobiDBLite consensus disorder prediction 578 601 - -
Lan8g0865 1609 MobiDBLite consensus disorder prediction 1530 1609 - -
Lan8g0865 1609 ProSiteProfiles BAH domain profile. 37 152 IPR001025 GO:0003682
Lan8g0865 1609 MobiDBLite consensus disorder prediction 546 565 - -
Lan8g0865 1609 SMART TFS2_5 320 399 IPR003617 GO:0005634
Lan8g0865 1609 MobiDBLite consensus disorder prediction 401 525 - -
Lan8g0865 1609 SMART BAH_4 37 152 IPR001025 GO:0003682
Lan8g0865 1609 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1609 - -
Lan8g0865 1609 MobiDBLite consensus disorder prediction 616 636 - -
Lan8g0865 1609 Gene3D - 25 254 IPR043151 -
Lan8g0865 1609 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1 1609 - -
Lan8g0865 1609 MobiDBLite consensus disorder prediction 508 525 - -
Lan8g0865 1609 ProSiteProfiles TFIIS N-terminal domain profile. 314 400 IPR017923 -
Lan8g0865 1609 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 301 410 IPR035441 -
Lan8g0865 1609 MobiDBLite consensus disorder prediction 667 685 - -
Lan8g0865 1609 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 267 401 IPR035441 -
Lan8g0865 1609 MobiDBLite consensus disorder prediction 180 209 - -
Lan8g0865 1609 Pfam BAH domain 38 144 IPR001025 GO:0003682
Lan8g0865 1609 MobiDBLite consensus disorder prediction 1226 1255 - -
Lan8g0865 1609 CDD TFIIS_I 335 398 - -
Lan8g0865 1609 MobiDBLite consensus disorder prediction 403 487 - -
Lan8g0865 1609 MobiDBLite consensus disorder prediction 210 242 - -
Lan8g0865 1609 MobiDBLite consensus disorder prediction 174 252 - -
Lan8g0865 1609 Pfam TFIIS helical bundle-like domain 348 397 IPR017923 -
Lan8g0865 1609 MobiDBLite consensus disorder prediction 778 812 - -
Lan8g0865 1609 MobiDBLite consensus disorder prediction 1581 1597 - -
Lan8g0865 1609 MobiDBLite consensus disorder prediction 577 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0865 Lan-Chr8 10416345 10422824 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lan8g0865 BAH 2.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0865 - - lang:109335858 2552.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0054 5 668389 678035 Lan8g0865 8 10416345 10422824 LSH
Lan8g0865 8 10416345 10422824 Lan20g1208 20 17597182 17604772 LSH