Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0863 ATGTATGGTAATTGGTTTTTTGAGCATACCCATTTGAAGATGCAATGGATTCATCATCAAATCCACCAAAAAGATGGTTACTTGAACTACTATCCTCCACCAATACAAGAACCAATGTCTTCTTCAACTTCAACACCATCTTCTGGTACTAGAATAAGTCCAGCAATTCTTTTCATTATAGTGATTCTAGCTGTTCTCTTTTTCATTTCTGGTATCCTCCACCTGCTTGTTAGATTTCTCATAAAGCATCCATCTTCATCTTCATCTCCTAGATCTAACAACAGGCATGAAATTTCAGCCTCTGATGCTCTCCAAAGACAGCTTCAGCAGCTTTTTCATCTTCATGACTCAGGTTTAGATCAGGCTTTCATTGATGCACTTCCTGTTTTCCATTACAAAGAGATTGTGGGTCCAAAAGAGCCATTTGATTGTGCTGTTTGTTTATGTGAGTTTTCTGAAAAGGATAAGCTAAGGTTGTTACCTATGTGCAGCCATGCTTTTCATATAAGTTGTATAGATACTTGGCTTTTGTCAAACTCAACATGCCCTCTTTGTAGAGGGACACTCCTTACACAAGGGTTTTCAATTGAGAATCCAATGTTTGATTTTGATGATTTGAGGGAAGAAGATGAAGGGTGTCCTTGTAATGTGGAAAGTGGATTTAATAAGGAGAAGAAAGTTGTGGTTGAAGAAAGTGTAGTGGTTGATAAAGGGGTTTTCCCTATAAGGCTTGGTAAATTCAGGAAGATGAGTTTAGAGGAAGATGGGGAGAGTGGTGTAGGAGAAACAAGTAGTAGTAATTTGGATGCAAGAAGATGTTACTCTATGGGATCTTACCAATATGTGGTTGGAAATTCCGAACTCAGGGTCGCCTTGAACCATGACCGAAAATGTCGAAATTTTAAGTTCACATCCAAAGGAAATGAACAACAAGGTGAGAATGAGAAGCTTTCAGTGGAGGAGGATATGGAAGAAGCAAAGAAGATTACAAGTGTGAGTAAAGGTGAAAGCTTTTCTGTCTCCAAAATCTGGCTGTGGCCAAAGAAGGGAAAGTTTTCTAGCTCTAATGAGACTCCTCAAATCAGCATGCCATCTTTTCTTAACACATTGGAGTGA 1116 0.388 MYGNWFFEHTHLKMQWIHHQIHQKDGYLNYYPPPIQEPMSSSTSTPSSGTRISPAILFIIVILAVLFFISGILHLLVRFLIKHPSSSSSPRSNNRHEISASDALQRQLQQLFHLHDSGLDQAFIDALPVFHYKEIVGPKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHISCIDTWLLSNSTCPLCRGTLLTQGFSIENPMFDFDDLREEDEGCPCNVESGFNKEKKVVVEESVVVDKGVFPIRLGKFRKMSLEEDGESGVGETSSSNLDARRCYSMGSYQYVVGNSELRVALNHDRKCRNFKFTSKGNEQQGENEKLSVEEDMEEAKKITSVSKGESFSVSKIWLWPKKGKFSSSNETPQISMPSFLNTLE* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0863 371 ProSiteProfiles Zinc finger RING-type profile. 144 186 IPR001841 -
Lan8g0863 371 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 14 360 - -
Lan8g0863 371 MobiDBLite consensus disorder prediction 351 371 - -
Lan8g0863 371 Pfam Ring finger domain 143 186 IPR001841 -
Lan8g0863 371 MobiDBLite consensus disorder prediction 303 322 - -
Lan8g0863 371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 192 IPR013083 -
Lan8g0863 371 CDD RING-H2_PA-TM-RING 143 186 - -
Lan8g0863 371 MobiDBLite consensus disorder prediction 350 371 - -
Lan8g0863 371 SUPERFAMILY RING/U-box 123 192 - -
Lan8g0863 371 SMART ring_2 144 185 IPR001841 -
Lan8g0863 371 PANTHER BNAC06G12870D PROTEIN 14 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0863 Lan-Chr8 10402179 10404185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0863 41 351 C3H Transcription Factor Family AT2G18650 41.520 1.95e-56 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0863 - - gmx:100806337 499.975