Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0860 ATGTTAACAAATGTTGTGATTTTTTCAGCACAGGTTTTGACAATGACACTTATTATATCTATGGTACTACTATTTGGAGGAGTTGTGCTCATGGTCCTACTTCATGTTTGCATCACTGGTAGAGCCTCTAGAAGAGAAAGCACAGGTTCAGTGGTTGAGAATGGAGCAAATGGAAGCAGAAGCATGTCCAAAGATGACTTGGAGAAGCTTCCATGCTATGATTACATTGCCAAAGACAATACAAGTAGTCCTGTGGATTGTGCAGTTTGCTTGGAGAACCTTATTGTTGGGGACAAGTGCAGGTTGTTGCCTATATGCAAACACAGTTTTCATGCTCAGTGTGTAGACACATGGCTTCTAAAGACACCTTTATGTCCAATCTGTAGATCCAGTGCTGATTCTTCACACAATGGAAACCAATTTGTAAGTAACAATGGATACTTTGTTGAACAAAACAGTGAGTCTAGGGAAATCCAAAGTAGCACAGAAAGTGGTACATCTCTTAATGTTTATGTTGGTATAGAATTGAGAGAAAATGTAATAATAGGAAGCACCAACTCTGGTCATAGAGTAGTTGAATCAAGAACACATCAAATAGGTACAACTGAAAATCACATGATATCTGCTACCACTTTGTCTCATGCTGTACAAGTTGCAGTTCTGTGA 666 0.3889 MLTNVVIFSAQVLTMTLIISMVLLFGGVVLMVLLHVCITGRASRRESTGSVVENGANGSRSMSKDDLEKLPCYDYIAKDNTSSPVDCAVCLENLIVGDKCRLLPICKHSFHAQCVDTWLLKTPLCPICRSSADSSHNGNQFVSNNGYFVEQNSESREIQSSTESGTSLNVYVGIELRENVIIGSTNSGHRVVESRTHQIGTTENHMISATTLSHAVQVAVL* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0860 221 SMART ring_2 87 128 IPR001841 -
Lan8g0860 221 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 15 182 - -
Lan8g0860 221 Pfam Ring finger domain 86 129 IPR001841 -
Lan8g0860 221 PANTHER RING-H2 FINGER PROTEIN ATL3-LIKE 15 182 - -
Lan8g0860 221 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 50 134 IPR013083 -
Lan8g0860 221 SUPERFAMILY RING/U-box 80 134 - -
Lan8g0860 221 CDD mRING-H2-C3H2C2D_ZSWM2 87 129 - -
Lan8g0860 221 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0860 Lan-Chr8 10375140 10376408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0860 59 131 C3H Transcription Factor Family AT1G74410 41.096 3.75e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0860 - K15692 lang:109353575 437.573