Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0858 ATGGATTCACACCCTCTCCGAATCGACCTCAACCAGATCCCTTCTCCTTCCACTTTCCTCGATACCATTGATGTCGTTCGCGCATACCACCAATACCCTGCCCCTCCGTCACACCCGGCGGCGCTCCTCCCGCGTGGATCAACCCTCTGTGCCGCCTGCAGCAACACCGGAACCAGTGGGGTCCACGCCATTGTCTGTGATGCCTGCGAGCGTGGATTTCATGTCCACTGCGTTGGGGTTCGCGGTGGACGCGGCATCGTTGAGTGGCTCTGCGGCGAGTGTGTGGCTGGTGGAGTGAAGAGTAAGCTGTGGCCGTTGGGGGTTAAGTCTAAGCAGCTTCTTGATATCAATGCTTCGCCGCCTAGCGATGTTGACGGCGAAGAGTTGCAGGATTTGAGGAAGCACACTGTGGGTGATAATCCATTTGGTGCCCCAGTTGCATATTCAAATTTGCACAACGGATGTGCTTTTGGATTCCAAAAGGCATCAGGAGTTGTGACACATGCTGTTAGAGTGGGTTCTGAGGATATAAGAAATCATACCCAATCATTGACTAGAAGCTTTGAGGAGGGTCTTAGAGATTTTATATCCGAAAGGTGTGGCGTGCTAGAGGAAGGTTGGCGAGTGGAATTTAGACAATCAGTGTGCAGCTCTGAAGTGTATGCAGTTTACCGTGCACCAGATGGGAAGGAATTTGATTCTTTGTATGAAGTAGCTTGTTATTTGGGGGTAACATCTGGATACAATTCTATGGAATCCGAAATAAGAAATGACAAGTCAGGTGGTCCTCAACCATCCAGAAAAAGAAAATCAACAAAAATGCCAGCAGCTAATTGTTTTGCAGAAAAGTGGGGAACCTTGATTAATAGTTATTGTAAGGATCCCCCATTTGATGGGTTAAGTGTTGAATGTGCTGCTATTGGTGGCAATATCCGGAAAGGTACTGAAGCTGAAATTAGAAGAGAAGAGGATGGCCTCTCTAGCCCTGAGCAATCTTCTGATGGACTTCCTCTGCAGTTCAAGGACTTCTTTGTTCTTTCTTTGGGAAAAGTTGATGGTAGACTTTCATATCATGATGTTAACCTTATCTATCCTGTAGGTTATAAATCTTCTTGGCATGATAAGATTACTGGCTCTCTTTTTACATGTGAAGTTTTGGAGGGCGGTGAGTCAGGGCCTATATTTAGGATCAGAAGGTGTTCTTGTTCGAAATATGTTGTTCCGGTTGGGTCAACCATCCTCTCAGTGTCGAGTCTTAGTCAACAATTTGTGAGTCAAACGAATGAAGAATGTGAGAGAAAGACTAATGATGATATGGATCATGATGGTGATGAAAGTATTCAGATGATCCTTTCAGACCCTTGTGTTCCAACAGAAAATGACGTCATGAGTTGTATAGAAAGTTTCTTGAATGAAGCACTTAATACTTGTACATCAGACATACTGCAACCTGTAGCTAGTTCAGTTCAAGATAAAAGTAGAAATTCATTAGCTGATGACTCATGGTCGGTAGATGACATTGGTGAAATTTTGGTGGAAGAGCGGTCATCATCCTCAGCATGGGGAGTTATGTCTCAAAAGTTAGTCAATGCCTGCAAGGATATCTGTAAGAAGAAAGGAATTCTGAAATTCTATTGTAAACATGTTGAAAACGAAACATGCTTCAATGAATGGGATGCAAGGAATGGAAGAAATCATTCACACATTTCTTCATTGGATAAATTTTGTGGTTCAATTGGTTCAGTCAGCATACCAGATGTAATTCATGCAGAAAATGATCTGGATAGTCTCTCCGAGGAATTAGTAAAATGGATAGGGCAAGACAGATTTGGATTAGATGTTGAGTTTGTGCAAGAAATATTAGAACAGCTTCATGGTGTCCAAGATTTTTCACAGTATGAACTTCTAAATAGTAGAAGTAATAGCTCTTCATTTCCAACAGTTGAAAATGGTTTCCTAGTGGTTGAACAGAGAGGTGGATCACAATATCAAGAAGAAGAAGCAGTTCAAGATTTATATAGGAGGTCCAAGAAAGCGAGACCGACTGCAAAATGTGTTAAGGAAAATCGTTGTCCACCACCTCCTGGGAAGCCACTGTGCTCTAGGGTTCCTAATAAACATATTGGTGACATTTTTCAGGCTTGGGAACTTATAGAGCGCTTTCATGAAATTCTGGACCTGAAAGAACCATTGTTGTTAGATGAGCTAGAGAAGGAACTTATCAACCCATGGTTTGATGGATTGGAATTTGTTGAGAAATGTGAGAGGGAAACAAATGGCAGTCAAGTTTTAAATTTGCCAGGTGGTGATGGTAATTGCAGATCCCCAAGGTGTGAACTTGGTCCATCAGGTTCTGTAGAAAGTTCTCATGCATTTATTCAAGTTGAAACCGAAGCAATGAAACAGGCTGCTCAAGCTAAGCTTGCGTCTTTTACTTATGCCAGATGCTTTGGTGTTGCTTTGACAAAGACACATAATTCCTTGCTAAGAGTGCTTATAGGTGAACTGCAATCAAAAGTGGCTGCTCTGGTAGATCCAAGTTTTGAGTCTGGAGAGACTCGAAGTAGACGGGGAAGAAGGAAAGATATAGATATTGCAACTCCTGCTATACGAACCAAGCTCAATATGCTTCCCAATAATGAATTGACTTGGCCAGAATTAGCTCGTAGATACATCTTGGCTGTCTTATCAATGGATGGTAACCTGGACTCTGCAGAAAGTACTGCACGCGAAGGTGGTAAAGTATTTCGTTGCTTGCAAGGTGATGGTGGTTTGCTGTGTGGTTCCCTTTCTGGCGTGGCTGGGATTGAAGCAGATGCACTGTTGCTTGCAGACGCAACAAAGAAAATCTTTGGTTCTTTGAGTGAAGACAATAATGTACTTACCATTGAAGAAGAGGAGTCTGATGTGAAGGATGATTCTGAGAATCTTCTGGGTGGTGATGACAGTATTCCTGAATGGGCAATAGAATTGGAACCTGCTAGAAAACTACCAACAAATGTTGGAACCCGTATCAGGAGGTGTGTTTATAATGCTCTGGAGAAGAATCCGCCAGAGTGGGCAAAAAAAATTCTGGAGCATTCAATTAGCAAGGAAGTGTACAAGGGCAATGCTTCTGGGCCAACAAAGAAAGCAGTTCTTTCAGTGTTGGCTACTGTAGCTGGTGAAGGATTGCAGAAGAAGCCACCCAAGAAAAGAAGGAAGAAGACTGAAATATCTATTTCTGACATCGTCATGAAACAATGTCGCGTTGTATTACGTCGTGCAGCTGCTGCAGATGACTCGAAGGTTTTTTGCAATTTGCTGGGAAGAAAGTTAACGAACTCTTCTGATAATGATGATGAGGGGCTTCTTGGATCTCCAGCTATGGTGGCCCGCCCTCTTGACTTCCGGACTATTGACCTAAGATTGGCTGCTGGAGCTTATGGTGGATCTCATGAAGCTTTTGTTGAGGATGTTCGTGAGCTGTGGAACAATGTTCGTGTTGCTTTTGGGGATCAACCCGATTTAGTTGAACTGGCTGAAAATTTATCCCAGAACTTCGAATGGTTGTATAAAGAGGAGGTCGTCGCTTACTCCCAAAAATTTGTGGAGTATGCTAAACTGGGATGCTTAAATGCAGAAATGAGAAAAGAAGTTCACAATTTTATTGCATCAACTAGAGAGATTCCTAAGGCCCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGCATTGATAGGGATGATGACAGTGTTCTACTATGTGATACTTGTGATGCTGAGTATCATACATATTGCTTAAATCCTCCACTTGCAAGGATCCCTGAAGGAAACTGGTACTGCCCTTCTTGTGTTGTTGGTAAGCGTGGAACTGAAGATGTCACAGAACGCAAACATATTATTTGCAAACGTCGAAGGAAAAGATTCCGTGGAGAAGTTAATTCTCTTTACTTGGAATCCCTAACTCATTTATCAGCTGTAATGGAAGAAAAAGAATATTGGGAGTATAGCACGGGCGAGAGAACTTTCCTTCTAAAGTTTTTATGTGATGAGTTGCTTAACTCTTTCCTGATACGCCACCACCTTGAGCAATGTGCAGAGTTGTCTGTTGAGTTACAGCAGAAATTGCGTGCATTTTATGTTGAGTGGAAAGGTCTGAAAGCTAAAGAAGCCATCTTATCCACAAAAGCTGCAAAAATTGATACATGCTTGCTTAGTAAAACTGGAGAAGTTGTTCATAAGGAAGGGTTCCCAGCTACGCTCGTATCTGTGACAAACTCTGATACTGGTAGCCAAAGTATGAGTTCTGTAGATGTTGAGGGGCAACATAGGAAAATCTCTGCAGCAGTGGAGTCTGAATGTATTGATAAATTCACTAAATCTTCTCCATCGCCAAATCACATGGACCGAGAAATTAACGATGCTGGTGGAGCAGATCATCATATCCTGGGTAACCATCAGAAATGTGAGGGAAGGGACATATCTACTATTGTGACATCCCAGCAAGGACAATTTGTGCCTGTTGGTGCTCCTCAGATTGCTGTTAATGAAGCCCAACCTTACCATGTCGAGCTCAATGCAACCAGGCGTGAAATTTCGACACTACAGGACTCCATAGCCAGTGTACAATCACAGCTTCTGAAGCTCCCTGTTCGCCGGGAATTTTTGGGTTCTGATTCCATTGGTCAATTGTACTGGGCTTCGGCTTTGCCCAGAGGACATTCATGTATAGTTGTTGATGCAAGTGATGCACTGTTGCACGGGAGAGGAATGGCATCTGACAGAGACTCTGTAGATAAGTTTTCATTTATGCCGCATTCTGCACTTACTGCAAAGGATAATTATAAGATTATTCAGCCAAGTAATGCTTTGGGGATTAGTTCACCGTGGGTTGCATATGAAACTGATGGAGAAATTGAGGAGCTCTTAAGTTGGCTGAACGATAAAGATGCTAAAGAAAAAGAACTAAAAGTGTCCATAATGCTGTGGTCAAAATCAAGATTTCATGACTTGATTAATGCACAGACTGAAGGTCAGGTTGAGGACCAAGGACCTTTTTCTATCCCAGGAATCAGAGAGAAAATATTATCCTCTCTTGTTATGAAGGCGACATCATTGCTGGAAAAGAAATATGGTCCTTTCTTTGAGTGGGATACCATTGAGGTGTTGAAGAAGCTGAACAAAAAGGCCAGAAACACTAACGATTTAAAAATGTACAGGTGTGAATGCCTAGAACCCATTTGGCCTTCTAGGAAACACTGCATATTTTGCCACAAAACTTTTCTGAATGATGTTGACCTGGAGGGGCACAATGATGGCAAATGTAATGCAGGTCTTCTGGCCTTGGAGAAGAATAAGGATAGTAGTGGATCTTCTAAAGGAAGAGGGAACTTGAAATGTGGCACCTCGAGTGAAAAGTTCAGAGGTGATGCTGACACAGCTGGAACTTCAATCAATGGATATTCAACTTCAAATCTTAGCTCAAGTTTGATTAAATTTTCAAATGAAGGATTTTCATGCCCGTTTAACTTGGGAGATATATGTTCAAAATTTGCAACAAATGATTCCAACAAGGAACTTGTCAGAGAGATAGGTCTTATTGGTTCAGATGGTCACCCATCATTTGTTCCTTCAATATCTCCTTTTGTTAGCGATTCTACAGTTATGCTATTCACAGCTCAAAATGATGATAATGTTGTTAATGGTGAGTCCAAAGGTTTAGAAAGCCAGGTTTCTCAAGGAAGTACTGATGGAGCTGGCAGGTTAGCGGCAAATGAAAGCAATAATTTAGGGAACCCCAATACATCTCTGGTAGAACACAGAGATGGAAAATCCTCTTTCCCTATTCCTGCTTCAGATATGGGGGTCGATGGCTGCTGTGTGGTCCCTTCATCTTCATTGAGACCATTAGTAGGAAACGTTTCACATATTTTGAGGCAACTTAAGATAAACCTACTTGATATGGATGCTGCACTCCCAAAAGTTGCTCTAAAACGATCAAAGGTGGAGTTGCATGGAAGGCAAGCTTGGCATGCATTCGTTAAATCTGCTCAGACGATATATGAGATGGTTCAAGCAATAATCACATTTGAGGATATGATCAAGACAGAGTACTTAAGGAATGACTGGTGGTATTGGTCATCATTCTCAGCTGCTGCTAAATCTTCTACTTTGTCTTCCCTTGCGCTTCGCTTGTACTCCCTTGATTCAGCCATCATATATGAGAAACTGCTCAGTTCAAATATGACCGACAGCCCCAAACCTTCCATTGCGGAACTGAAGCAACCACCGATCATTGTGGATGCAGATAAATCAAAAGCAACACGGAAGTCGAACAGGAAAAGGAAGGAATCAGATGGCTGA 6342 0.4238 MDSHPLRIDLNQIPSPSTFLDTIDVVRAYHQYPAPPSHPAALLPRGSTLCAACSNTGTSGVHAIVCDACERGFHVHCVGVRGGRGIVEWLCGECVAGGVKSKLWPLGVKSKQLLDINASPPSDVDGEELQDLRKHTVGDNPFGAPVAYSNLHNGCAFGFQKASGVVTHAVRVGSEDIRNHTQSLTRSFEEGLRDFISERCGVLEEGWRVEFRQSVCSSEVYAVYRAPDGKEFDSLYEVACYLGVTSGYNSMESEIRNDKSGGPQPSRKRKSTKMPAANCFAEKWGTLINSYCKDPPFDGLSVECAAIGGNIRKGTEAEIRREEDGLSSPEQSSDGLPLQFKDFFVLSLGKVDGRLSYHDVNLIYPVGYKSSWHDKITGSLFTCEVLEGGESGPIFRIRRCSCSKYVVPVGSTILSVSSLSQQFVSQTNEECERKTNDDMDHDGDESIQMILSDPCVPTENDVMSCIESFLNEALNTCTSDILQPVASSVQDKSRNSLADDSWSVDDIGEILVEERSSSSAWGVMSQKLVNACKDICKKKGILKFYCKHVENETCFNEWDARNGRNHSHISSLDKFCGSIGSVSIPDVIHAENDLDSLSEELVKWIGQDRFGLDVEFVQEILEQLHGVQDFSQYELLNSRSNSSSFPTVENGFLVVEQRGGSQYQEEEAVQDLYRRSKKARPTAKCVKENRCPPPPGKPLCSRVPNKHIGDIFQAWELIERFHEILDLKEPLLLDELEKELINPWFDGLEFVEKCERETNGSQVLNLPGGDGNCRSPRCELGPSGSVESSHAFIQVETEAMKQAAQAKLASFTYARCFGVALTKTHNSLLRVLIGELQSKVAALVDPSFESGETRSRRGRRKDIDIATPAIRTKLNMLPNNELTWPELARRYILAVLSMDGNLDSAESTAREGGKVFRCLQGDGGLLCGSLSGVAGIEADALLLADATKKIFGSLSEDNNVLTIEEEESDVKDDSENLLGGDDSIPEWAIELEPARKLPTNVGTRIRRCVYNALEKNPPEWAKKILEHSISKEVYKGNASGPTKKAVLSVLATVAGEGLQKKPPKKRRKKTEISISDIVMKQCRVVLRRAAAADDSKVFCNLLGRKLTNSSDNDDEGLLGSPAMVARPLDFRTIDLRLAAGAYGGSHEAFVEDVRELWNNVRVAFGDQPDLVELAENLSQNFEWLYKEEVVAYSQKFVEYAKLGCLNAEMRKEVHNFIASTREIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVVGKRGTEDVTERKHIICKRRRKRFRGEVNSLYLESLTHLSAVMEEKEYWEYSTGERTFLLKFLCDELLNSFLIRHHLEQCAELSVELQQKLRAFYVEWKGLKAKEAILSTKAAKIDTCLLSKTGEVVHKEGFPATLVSVTNSDTGSQSMSSVDVEGQHRKISAAVESECIDKFTKSSPSPNHMDREINDAGGADHHILGNHQKCEGRDISTIVTSQQGQFVPVGAPQIAVNEAQPYHVELNATRREISTLQDSIASVQSQLLKLPVRREFLGSDSIGQLYWASALPRGHSCIVVDASDALLHGRGMASDRDSVDKFSFMPHSALTAKDNYKIIQPSNALGISSPWVAYETDGEIEELLSWLNDKDAKEKELKVSIMLWSKSRFHDLINAQTEGQVEDQGPFSIPGIREKILSSLVMKATSLLEKKYGPFFEWDTIEVLKKLNKKARNTNDLKMYRCECLEPIWPSRKHCIFCHKTFLNDVDLEGHNDGKCNAGLLALEKNKDSSGSSKGRGNLKCGTSSEKFRGDADTAGTSINGYSTSNLSSSLIKFSNEGFSCPFNLGDICSKFATNDSNKELVREIGLIGSDGHPSFVPSISPFVSDSTVMLFTAQNDDNVVNGESKGLESQVSQGSTDGAGRLAANESNNLGNPNTSLVEHRDGKSSFPIPASDMGVDGCCVVPSSSLRPLVGNVSHILRQLKINLLDMDAALPKVALKRSKVELHGRQAWHAFVKSAQTIYEMVQAIITFEDMIKTEYLRNDWWYWSSFSAAAKSSTLSSLALRLYSLDSAIIYEKLLSSNMTDSPKPSIAELKQPPIIVDADKSKATRKSNRKRKESDG* 2114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0858 2113 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1184 1293 IPR013083 -
Lan8g0858 2113 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 3 2113 - -
Lan8g0858 2113 ProSiteProfiles Zinc finger PHD-type profile. 47 97 IPR019787 -
Lan8g0858 2113 Gene3D - 336 451 - -
Lan8g0858 2113 SMART PHD_3 49 95 IPR001965 -
Lan8g0858 2113 SMART PHD_3 1232 1278 IPR001965 -
Lan8g0858 2113 Gene3D - 1059 1183 IPR036427 GO:0005515
Lan8g0858 2113 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 193 260 IPR001739 GO:0003677
Lan8g0858 2113 SUPERFAMILY Bromodomain 1067 1187 IPR036427 GO:0005515
Lan8g0858 2113 MobiDBLite consensus disorder prediction 1894 1936 - -
Lan8g0858 2113 ProSiteProfiles FYR domain FYRN motif profile. 335 388 IPR003888 GO:0005634
Lan8g0858 2113 MobiDBLite consensus disorder prediction 2076 2113 - -
Lan8g0858 2113 PANTHER OS02G0192300 PROTEIN 3 2113 - -
Lan8g0858 2113 Coils Coil 1518 1538 - -
Lan8g0858 2113 CDD PHD_SF 50 94 - -
Lan8g0858 2113 Pfam PHD-finger 1232 1278 IPR019787 -
Lan8g0858 2113 SUPERFAMILY FYVE/PHD zinc finger 1221 1282 IPR011011 -
Lan8g0858 2113 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 102 IPR013083 -
Lan8g0858 2113 Pfam Methyl-CpG binding domain 194 247 IPR001739 GO:0003677
Lan8g0858 2113 ProSiteProfiles FYR domain FYRC motif profile. 494 637 IPR003889 GO:0005634
Lan8g0858 2113 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1312 1356 IPR028942 -
Lan8g0858 2113 ProSitePatterns Zinc finger PHD-type signature. 1233 1277 IPR019786 -
Lan8g0858 2113 MobiDBLite consensus disorder prediction 252 274 - -
Lan8g0858 2113 ProSitePatterns Zinc finger PHD-type signature. 50 94 IPR019786 -
Lan8g0858 2113 SUPERFAMILY FYVE/PHD zinc finger 46 105 IPR011011 -
Lan8g0858 2113 ProSiteProfiles Bromodomain profile. 1123 1171 IPR001487 GO:0005515
Lan8g0858 2113 SUPERFAMILY DNA-binding domain 194 274 IPR016177 GO:0003677
Lan8g0858 2113 MobiDBLite consensus disorder prediction 1894 1934 - -
Lan8g0858 2113 Pfam Bromodomain 1121 1175 IPR001487 GO:0005515
Lan8g0858 2113 CDD PHD1_Lid2p_like 1232 1277 - -
Lan8g0858 2113 MobiDBLite consensus disorder prediction 2096 2113 - -
Lan8g0858 2113 Gene3D - 196 254 - -
Lan8g0858 2113 ProSiteProfiles Zinc finger PHD-type profile. 1230 1280 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0858 Lan-Chr8 10354666 10367676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0858 6 2113 C2H2 Transcription Factor Family AT3G01460 43.891 0.0 1658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lan8g0858 Bromodomain 0.00016 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0858 K22768 - gmx:100791814 2779.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0051 5 580357 597107 Lan8g0858 8 10354666 10367676 LSH
Lan8g0858 8 10354666 10367676 Lan20g1195 20 17336297 17350728 LSH