Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0833 ATGAATGATGCTGCTGCTGCTGCAATTGTTGAGGCATATTACTCTGAGTTTGTGGAATTTGACCCTAAAGGAAGATATGGAAGATACAATGAAATTCTTGGCAAAGGAGCTTCCAAGACAGTCTATAGAGCATTTGATGAGTATGAAGGGATAGAAGTAGCATGGAATCAAGTAAAGCTTTATGACCTTTTGCAGAATCCTGAAGAGCTAGAGAGGTTATACAGTGAAATTCATCTTCTTAAGACATTGAAACACAAGAACATCATGAAGATTTACACTTCTTGGGTTGATACTTCCAGTAGGCAGATTAACTTTGTTACTGAGCTGTTTACCTCCGGGACTATCAGACAGTACAGGCTCAAACACAGAAGGGTTAACATCAGAGCTGTTAAGCATTGGTGCAGACAGATTTTGGAAGGGCTTCTCTATCTCCACAGCCATGACCCTCCTGTGATCCATAGAGATCTCAAGTGTGACAATATTTTCATCAATGGCAACCAAGGGGAAGTCAAAATTGGTGATCTTGGCCTAGCTGCAATCCTTCGAAAATCTAATGGTGCTCGCTGTGTTGGCACACCTGAGTTTATGGCTCCAGAAGTGTATGAAGAGGATTACGATGAATTGATTGACATATACTCTTTTGGAATGTGCATTTTGGAGATGGTCACCTTTGAATATCCTTATAGTGAATGCAATCACCCTGCTCAAATCTACAAGAAAGTTGTTTCTGGGAAGCTGCCAGAAGCTCTTTACAAAGTAGATGATCCTGAGGTTAGGCGGTTTGTAGAGAAATGCTTAGCAACTGTGTCTCTCAGACTTTCAGCTAAGGAACTCTTAGAGGACCCTTTTCTCCACATTGATGATTCTGGATCTGACTTTCATTGCAGTAGCAACACTTCAATGAGTGGGTACACCAATAATAATAATATTGGTGGTTATGGACCTCTATATGAATTGGATTATCATCAACATGATTTTGAAACGAGGGAAATTGATCACTTTGAATGTGAAGAGCATGATAGTTTGGCTGAAGTTGACACCTCAATCAAAGGCAGTAGAAGAGAAGATGAGGGCATTTTTCTGAGAATCAGAATAGCAGATAAGGAAGGCCGAGTTCGAAACATCTACTTCCCATTTGACACTAAGACCGATACAGCATTGAGCGTTGCAAATGAAATGGTAGCTGAGCTTGACATAATTAACCAAGATGTAACAGAACTAGCAGATATGATAGATAATGAAATTGAAACCTTGGTCCCAGAGTGGAAAAGAGGGCCCAGAATAGAGGAAAGTTCAGAATGCACAAGTACAAGTTTATGCCTCAACTGTGCTACAAACGGTTCCTTCTTTGATCATGTGTCTTCCAATAATCCAACTGCCAAAAATCTGAAGTTTCTTGATTGTTCTAAAAAGGGATGTGCAGCTGTTCACGGACGATTTGAGGAGATTACATACCAAGTTGAAGATTCTGAAAATAGTGCTACAGAAGGTGCACCTGCTGCATCAAGCCAAACAACTAGCATTCATTATACCAATATCAATATCTGGGCTAAGCGAGATGAGCCAGAGTTAGTTCCTGAGGGGTTGAAGGACATACATTGTAAAAAAGCTCATTACGCATCAAACATATCAACCATGAAGGAGGATGGGAAAAGTATTGATGAAAGTGATCCCAATGATAGAAAGCCTTGTTCTAGCCTGGCATCAAATTGTGTTATCTCGGACTATGAGAATGAAATTAGGCAAGAACTAAGATGGCTCAAAGCAAAGTACCAAATGCAGTTAAGAGATTTTAGAGACCAGCAACTAGAGCATGGGAAGGGTGGAGTTGGGAGGATGATGATGGAGTCTGCGTGTGATCCTGGTGAGTTATCAGAGTTGGTTGAACCTTCCTTTGATGAGTTCCAACGTCAGACTTCTCTGATGACTACTTGCACTCTTCTATGGAAAGAACTCTCTGATCATTTCACTTCTCTTGAAAATAACCTTCTTTCCAAGTCTCTTTCTCTTAACCGCAAGATCTCTTCCCTCCACCACTCCACCGACACCTCCCTCCGACTTCTCAACCACCGCGACTCCTCCCTCGACCACTCCCTCCACCTCATCCTCTCCGACCTCAACTCCCACCGCCAAGCAGCTCTCCAACTCATCCAACAACAACAAGATCAAGATTCCGATGATAATAATAAACAGGATTCACCTCTCATGCTCAAACTCAAATCCTTCTGCCTCACAATGGACGCCCTAGGGTTTTGGGAGTTCGTAATAGGAAAGAAAAAGGAATTAGAGACACTCAGGTCTCAGATTCCGATCGCTCTATCTGAATGCGTGGATCCACCCAAGTTCGTGTTGGAAGCAATATCAGAGGTGTTTCCTGTTGACAAGAGAGTTGAAAAAGGTGGAAATGACTTGGGATGGGCGTGTGTGTTGATTCTTGAGTCTCTAATACCTGTAATCATCGATCCAATAATAGGGAACTCAAGGCTTCTTCTTACTCCTACTGTCAAAGACAAAGCCAATCAGATAGCTCTTACTTGGAAGGAAACACTCAAACAAAGGGGTGGAATTCACAATCTTAAGACACCTGATGTTCATACTTTCTTGCAGCATCTCGTTACCTTTGGAATTGTCGACAAGGATCATGATCTCCATTTCTATAAGAAACTTGTCATTGCCTCTGCTTGGAGGAAACAGATGCCTAAGCTTGCACTTTCACTTGGTCTTCTCAACCAAATGCCTGATATCATTCAAGAGTTAATCAGCAAAGGCCAGCAGCTTGATGCAGTTCACTTTACATATGAAGTAGGTCTTGTGGACAACTTCCCACCTGTGCCACTGCTCAAATCATTTTTGAAGGATGCAAAGAAAGTTGCTGCCTCCATATCGGAAGATCCCAATAATGCAGGCCGAGCTGCGTACCTAGCTGCAAGAAAAGAGCAGTCTGCTCTCAAGGCTGTGATCAAATGCATTGAAGAGTACAAACTCGAGGCTGAATTCCCCCCAGAAAATCTGAAGAAGCGGCTTGAACAGTTGGAGAAGGTCAAGCCTGAGAAAAGGAAACCAGCTGCAGTCCCTGCCAACAAGAGAACACGTACAAGCAACAGTACTGGAGGCCCGATGCCTCCAGCCAAAGCTGGCCGTTTGACTAATGCATATGTGTCATCCTTCCCTGCTGCTCCTGCATTTGTCAGGTCTCCATCGCATGGGCAATACCCAGCTGCTCTTCCACCATATCCCTCCCCACCCCACATGTATGGCAGCAGAAGTCCACCTTATGCTTATTCACCAGAGCCAGCGCCAGCTATTGCAGGGTCATACCCAGCGCCTCCTCCCATGAATTATCCTCCTGCATATGGTGGCTATGGCAATGTTTTGGCACCAACTTATCAGCAGGCCTACTACCACCGATAG 3411 0.4345 MNDAAAAAIVEAYYSEFVEFDPKGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDLLQNPEELERLYSEIHLLKTLKHKNIMKIYTSWVDTSSRQINFVTELFTSGTIRQYRLKHRRVNIRAVKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNGARCVGTPEFMAPEVYEEDYDELIDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVVSGKLPEALYKVDDPEVRRFVEKCLATVSLRLSAKELLEDPFLHIDDSGSDFHCSSNTSMSGYTNNNNIGGYGPLYELDYHQHDFETREIDHFECEEHDSLAEVDTSIKGSRREDEGIFLRIRIADKEGRVRNIYFPFDTKTDTALSVANEMVAELDIINQDVTELADMIDNEIETLVPEWKRGPRIEESSECTSTSLCLNCATNGSFFDHVSSNNPTAKNLKFLDCSKKGCAAVHGRFEEITYQVEDSENSATEGAPAASSQTTSIHYTNINIWAKRDEPELVPEGLKDIHCKKAHYASNISTMKEDGKSIDESDPNDRKPCSSLASNCVISDYENEIRQELRWLKAKYQMQLRDFRDQQLEHGKGGVGRMMMESACDPGELSELVEPSFDEFQRQTSLMTTCTLLWKELSDHFTSLENNLLSKSLSLNRKISSLHHSTDTSLRLLNHRDSSLDHSLHLILSDLNSHRQAALQLIQQQQDQDSDDNNKQDSPLMLKLKSFCLTMDALGFWEFVIGKKKELETLRSQIPIALSECVDPPKFVLEAISEVFPVDKRVEKGGNDLGWACVLILESLIPVIIDPIIGNSRLLLTPTVKDKANQIALTWKETLKQRGGIHNLKTPDVHTFLQHLVTFGIVDKDHDLHFYKKLVIASAWRKQMPKLALSLGLLNQMPDIIQELISKGQQLDAVHFTYEVGLVDNFPPVPLLKSFLKDAKKVAASISEDPNNAGRAAYLAARKEQSALKAVIKCIEEYKLEAEFPPENLKKRLEQLEKVKPEKRKPAAVPANKRTRTSNSTGGPMPPAKAGRLTNAYVSSFPAAPAFVRSPSHGQYPAALPPYPSPPHMYGSRSPPYAYSPEPAPAIAGSYPAPPPMNYPPAYGGYGNVLAPTYQQAYYHR* 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0833 1136 Gene3D Phosphorylase Kinase; domain 1 12 108 - -
Lan8g0833 1136 Coils Coil 703 723 - -
Lan8g0833 1136 CDD STKc_WNK 25 284 - -
Lan8g0833 1136 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0833 1136 Gene3D Transferase(Phosphotransferase) domain 1 110 289 - -
Lan8g0833 1136 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 610 - -
Lan8g0833 1136 SMART serkin_6 27 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0833 1136 Gene3D - 358 443 - -
Lan8g0833 1136 ProSiteProfiles Protein kinase domain profile. 27 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0833 1136 MobiDBLite consensus disorder prediction 1013 1045 - -
Lan8g0833 1136 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Lan8g0833 1136 SUPERFAMILY Protein kinase-like (PK-like) 30 285 IPR011009 -
Lan8g0833 1136 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 10 610 - -
Lan8g0833 1136 Pfam Frigida-like protein 737 1021 IPR012474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0833 Lan-Chr8 10170798 10186715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0833 15 483 MAP Kinase Kinase Kinase AT3G22420 59.921 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lan8g0833 Frigida 3.2e-95 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0833 K08867 - gmx:100804179 947.192