Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0828 ATGTTCTTTTCATCTACATATCATCAACATGAATCCTCCATTAACCCTTACCTTACCACCTTTCCCTCTTCTTCTACTTACCCTAGTCTTAGTGCTGCTAATACCCTTCCTTGTTTCACTCATCCTCCTCCTCATGAGGTTGATGATTTTGTCACTAATACCTTTCTTCATGATCCACTTGTTGGTCTTGTCCCCTTCATACCCTCCACCACTACTAGTCAAACTCCTCATCATCATGCTTCATTCACAGAAGAAGCTGTTGCTAATTTGGCAATGCTTGATAATCAACAACATGCTTGCAATAATAATGACTCCTCCTATGGTTTACTTCACTATGGTAGTACCAATCCTAATTTGCTGACTCAGAAACCAGCTGCTGCCATAGCAAAGAAAGATAGGCACAGCAAGATTCACACATCACAAGGTTTGAGGGACAGGAGGGTGAGACTTTCAAGTGACATAGCAAGAAAGTTCTTTGATCTTCAGGAGATGTTAGACTTTGACAAACCTAGCAATACCCTTGAGTGGCTATTCACAAAGTCAGAGAATGCAATCAAAGAACTTGCAAGAAGTAAGCATAATAACAATAATAATAATAATGGGTTGCTGGACAACAACACATCAAATGAGAAACCATTGAGTGGCAGTGGTGGTGACAGTTCTAATTCTTCAAAAGGGAAGAAGTCGAAATGGACACATAGGGATCAAGATATTTGTACTACCATCCAGACTAAAAAGGAGTCAAGGGAAAAGGCTAGAGCAAGAGCAAGAGAAAGGACTTGCTTCAACAAGATGTGCAACAACAGTACTTGGAAATTAATAGAAGAAAGGACATCATGCCCTGCAATATCTTCAAACACTCCACAATATGAGGCTAATTGTGCAAGATGGCCACATCACCAGATGCTTAAACCTTACCCTTCTGACACTCACCACCCACTGGGTAGTGATGCCCCTTTTACTCTCAGCGATGGCTATAATGTTATTGAGGATTCTATTATGATAAAAAGGAACAATATGAAGCCATCTATGATGATGTCTTCTTCTCATAACCAACAAAACCTTGTGATCCCTAAGGAGTCAAGATTCAACAACAATGATGATTACCAATCATTCCCCTATTCCACCCAAAATTGGGATACTAATAATGGCAACTCCAACTTTTCTGGAATAGCCACCATGAATTTATCTACATTTTTCATGAACCAGTGA 1212 0.3977 MFFSSTYHQHESSINPYLTTFPSSSTYPSLSAANTLPCFTHPPPHEVDDFVTNTFLHDPLVGLVPFIPSTTTSQTPHHHASFTEEAVANLAMLDNQQHACNNNDSSYGLLHYGSTNPNLLTQKPAAAIAKKDRHSKIHTSQGLRDRRVRLSSDIARKFFDLQEMLDFDKPSNTLEWLFTKSENAIKELARSKHNNNNNNNGLLDNNTSNEKPLSGSGGDSSNSSKGKKSKWTHRDQDICTTIQTKKESREKARARARERTCFNKMCNNSTWKLIEERTSCPAISSNTPQYEANCARWPHHQMLKPYPSDTHHPLGSDAPFTLSDGYNVIEDSIMIKRNNMKPSMMMSSSHNQQNLVIPKESRFNNNDDYQSFPYSTQNWDTNNGNSNFSGIATMNLSTFFMNQ* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0828 403 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 48 398 IPR005333 GO:0003700
Lan8g0828 403 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 48 398 - -
Lan8g0828 403 MobiDBLite consensus disorder prediction 226 251 - -
Lan8g0828 403 MobiDBLite consensus disorder prediction 191 251 - -
Lan8g0828 403 MobiDBLite consensus disorder prediction 191 225 - -
Lan8g0828 403 ProSiteProfiles R domain profile. 246 264 IPR017888 -
Lan8g0828 403 Pfam TCP family transcription factor 129 264 IPR017887 -
Lan8g0828 403 ProSiteProfiles TCP domain profile. 130 188 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0828 Lan-Chr8 10153513 10155611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0828 123 200 TCP Transcription Factor Family AT1G67260 60.256 1.31e-25 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan8g0828 TCP 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0828 - - lang:109346833 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0828 8 10153513 10155611 Lan4g1898 4 27265965 27267974 LSH
Lan8g0828 8 10153513 10155611 Lan8g1133 8 15287262 15290151 PCT