Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0825 ATGAACGGCGAGGGAGCAACACCGACGTTCCAATCAATCCTTGAGAAACCACTTAAGCAACTGACAGAGGATGACATATCTCAGGTGACAAGAGAAGACTGTAGAAGATTCCTGAAACTAAAAGGAATGAGAAGACCTTCTTGGAACAAATCTCAAGCTATTCAACAAGTCATTTCACTCAAAGCTCTTCTTGAACCCGACCACGACCATCTTCAACCCGCCGTCGTACTCCACCATCCTCCACCACCACCACCACCACCACCACCACCACCGCACCCCAACAGGGAGTGTGCAACTAGTGGTTCAGTTGAGCAGATGACAATTTTCTATTGTGGCAAGGTCAATGTCTATGATGGAGTTTCACCTGATAAGGCTCGAGCAATCATGCAACTTGCAGGTACTCAACTCCACTTTCCTCAGGATCATCCTTTAAATACAAATGCACCACTTTCGCCTTCTCCTTCTCCTTCCCACCTTCCCCTTCATACAACAATCCTTCACCTTCCTCAATCAGATAAGATGGTGGAATATCCTCCACAATATAGGGAGAGAGGGAGCATAGCTCGCGATACTGAGAAGGCTCTTGCCTCAAATGGGAATTCAAGCCGCAGTAGCACTAGCTCTCCACCACAACCTAGACTCCCTCCTCATCTACCTGACAACCAACTAAAAGTTGCACTTCCCATTGATCTCAATGACAAAGATGTTGAAGAATGA 717 0.4672 MNGEGATPTFQSILEKPLKQLTEDDISQVTREDCRRFLKLKGMRRPSWNKSQAIQQVISLKALLEPDHDHLQPAVVLHHPPPPPPPPPPPPHPNRECATSGSVEQMTIFYCGKVNVYDGVSPDKARAIMQLAGTQLHFPQDHPLNTNAPLSPSPSPSHLPLHTTILHLPQSDKMVEYPPQYRERGSIARDTEKALASNGNSSRSSTSSPPQPRLPPHLPDNQLKVALPIDLNDKDVEE* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0825 238 MobiDBLite consensus disorder prediction 193 208 - -
Lan8g0825 238 MobiDBLite consensus disorder prediction 188 238 - -
Lan8g0825 238 Pfam tify domain 104 133 IPR010399 -
Lan8g0825 238 MobiDBLite consensus disorder prediction 139 162 - -
Lan8g0825 238 SMART tify_2 99 134 IPR010399 -
Lan8g0825 238 MobiDBLite consensus disorder prediction 73 99 - -
Lan8g0825 238 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 98 158 IPR040390 -
Lan8g0825 238 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 74 IPR040390 -
Lan8g0825 238 ProSiteProfiles Tify domain profile. 99 134 IPR010399 -
Lan8g0825 238 MobiDBLite consensus disorder prediction 76 95 - -
Lan8g0825 238 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 98 158 - -
Lan8g0825 238 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 9 74 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0825 6 192 Tify Gene Family AT4G14720 38.174 7.63e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lan8g0825 tify 9.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0825 - - gmx:100808970 229.18