Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0820 ATGCCTTTAAGGCAAATGAAAGAAAGCTCAGAGCAACACCTTGTGATCAAAACCAATTTGCAGAACCCTATGAGTGCAGTTAAGAAGGCACACAAAGCTACCCAAAGTGGAAAAGGTTCACTACCACCTTCACAACAAAACCAAAGCCAAACTTCACCTCAGGAAAGGAACAAAGGAAGAAGAAGAGGCAGAGGTGGCAGAAAATCTGATCAAGGAGATATTTTCACAAGACCAAGCTGCAGGCCTTGCACTATGACAACAACCACAGTAACAACAACTACTACTACTGCAAATGGAAGTGTTGAAAATGGTGACATTAATATGAGTTATCCTACTTCAAGCAAGTCTTCCAGCTTTGCTCCTAGGCCTGGGTATGGACAAGTTGGAACAAAATGTATTGTTAAGGCTAACCACTTCTTTGCAGAGTTCCCAGACAAGGACTTGAACCACTATGATGTTACTATTACCCCAGAAGTGTCTTCGAGAAGAGTGAACAGGTCCATCATAGCAGAATTGGTGAGGCTGTACAAAGAGAGTGAGTTAGGGATGAGGCTTCCAGCTTATGATGGCAGAAAAAGTCTGTACACTGCAGGCCACCTTCCCTTTACCTTCAAAGAGTTTAAGATTAACATTGTAGATCAAGATCACGGAGTACATGTACATGTCCCCAAAAAGGAAAGAGAATATAAGGTGGTGATCAAGTTTGTTGCTAAGGCAAACTTGCATCACTTAGGACAGTTTCTAGCTGGTAAGCGTGCTGATGGACCACACGAGGCACTTCAAATCCTTGACATTGTTCTAAGAGAGCTATCAAATAAGAGGTATTGCCCCATTGGGAGGTCCTTCTTTTCACCCGATATTAGAGCACCACAACGCCTTGGAGAGGGATTGGAGTCATGGTGTGGATTCTATCAGAGCATAAGGCCTACTCAGATGGGTCTTTCCCTCAATATTGATATGGCATCTGCTGCATTCATTGAGCCTCTTCCTGTGGTAGACTTTGTTGGTCAGCTATTAGGAAAAGATGTACTGTCAAGGCCATTGTCCGATTCTGATCGCATTAAGATTAAAAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGAAGTGTCAGAAGAAAATATCGTGTTTCAGGGTTGACTTCTCAACCAACAAGAGAACTTGTGTTTCCTGTTGATGAGAACTCAACTATGAAGTCAGTAGTTGAATACTTCCAAGAGATGTATGGTTTCACTATTCAATATACTCACCTTCCTTGCCTTCAAGTAGGAAACCAAAAGAAGGCAAATTATCTACCCATGGAGGCCTGCAAAATTGTTGAGGGGCAACGTTATACAAAAAGATTGAATGAGAAGCAAATTACTGCTCTCCTGAAAGTTACTTGCCAGAGACCTCGTGATCGGGAAAATGATATTTTACGGACTGTTCACCATAATGCTTACAATGAAGATCCTTATGCAAAGGAATTTGGGATTGAAATCAGTGAAAAACTAGCTTCCGTTGAAGCACGAATTCTTCCTGCCCCTTGGCTTAAATATCACGAAAGTGGGAGAGAAAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAGCCGGTGGGCATGCATAAATTTTTCGCGGAGTGTGCAAGATAGTGTTGCTCGCACTTTTTGCAACGAGCTTGCTCAAATGTGTCAAGTATCTGGCATGGAATTTAATCTAGACCCAGTAATCCCCATCTACAACGCCAAGCCAGAGCAGGTAGAGAAAGCTTTGAAGCATGTTTACCATGCATCAGCAAACAAAACTAAAGGAAAAGAACTGGAGCTTTTGTTAGTAATATTGCCCGACAACAATGGGTCTCTATATGGTGATCTCAAGCGTATTTGTGAAACCGACCTTGGTTTAATTTCACAATGCTGTCTGACAAAGCATGTCTTTAAGATCACTAAACAGTATTTGGCTAATGTGTCTCTGAAGATTAATGTTAAGATGGGAGGTAGAAACACTGTTCTTCTAGATGCTATAAGTTGCAGAATACCATTGGTTAGTGACATACCAACCATAATATTTGGAGCAGATGTTACTCACCCTGAAAATGGAGAAGATTCTAGTCCCTCTATAGCAGCTGTAGTAGCATCCCAAGACTGGCCTGAGGTGACAAAATATGCCGGTTTAGTGTGCGCTCAAGCTCATAGGCAGGAGCTTATACAAGATTTGTACAAAACTTGGCATGATCCTGTTCGTGGCACAATTAGTGGTGGCATGATTCGAGATTTGTTGGTTTCCTTTCGAAAGGCAACAGGACAGAAGCCACAAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGACAGTTTTACCAGATTCTACTTCATGAGTTGGATGCGATCCGGAAGGCATGTGCTTCCTTAGAACCAAACTATCAGCCTCCAGTAACTTTCGTTGTCATACAAAAAAGACACCATACTCGGCTGTTCCCTAACAACCACAAGGACAGAACCAGTACAGATAAGAGTGGGAATATATTGCCCGGGACTGTTGTTGATACTAAAATCTGCCATCCAACAGAATTTGATTTTTATCTCTGTAGTCATGCTGGCATCCAGGGTACAAGTCGGCCTGCTCATTATCATGTTCTATGGGATGAAAACAACTTCACAGCCGATGGAATTCAGTCTTTGACCAACAATCTCTGCTATACATATGCTAGGTGTACACGCTCCGTATCTGTTGTTCCTCCAGCATACTATGCACATTTAGCAGCCTTTCGTGCTCGTTTCTACATGGAACCAGATATGCAAGAGAATGGCTCTACAGGTGGAGGTAATGCTGGCCATGGTTACAGAACTCGAACAGGTGGAGAGTGTGGTGTGAAGCCATTGCCAGCCTTGAAAGAAAATGTGAAGAGAGTAATGTTTTATTGTTAG 2952 0.4211 MPLRQMKESSEQHLVIKTNLQNPMSAVKKAHKATQSGKGSLPPSQQNQSQTSPQERNKGRRRGRGGRKSDQGDIFTRPSCRPCTMTTTTVTTTTTTANGSVENGDINMSYPTSSKSSSFAPRPGYGQVGTKCIVKANHFFAEFPDKDLNHYDVTITPEVSSRRVNRSIIAELVRLYKESELGMRLPAYDGRKSLYTAGHLPFTFKEFKINIVDQDHGVHVHVPKKEREYKVVIKFVAKANLHHLGQFLAGKRADGPHEALQILDIVLRELSNKRYCPIGRSFFSPDIRAPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVDFVGQLLGKDVLSRPLSDSDRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTVHHNAYNEDPYAKEFGIEISEKLASVEARILPAPWLKYHESGREKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDSVARTFCNELAQMCQVSGMEFNLDPVIPIYNAKPEQVEKALKHVYHASANKTKGKELELLLVILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTISGGMIRDLLVSFRKATGQKPQRIIFYRDGVSEGQFYQILLHELDAIRKACASLEPNYQPPVTFVVIQKRHHTRLFPNNHKDRTSTDKSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTGGGNAGHGYRTRTGGECGVKPLPALKENVKRVMFYC* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0820 983 Gene3D - 507 680 - -
Lan8g0820 983 ProSiteProfiles PAZ domain profile. 329 443 IPR003100 GO:0005515
Lan8g0820 983 Pfam N-terminal domain of argonaute 131 267 IPR032474 -
Lan8g0820 983 Pfam Mid domain of argonaute 526 603 IPR032473 -
Lan8g0820 983 Gene3D - 686 983 IPR036397 GO:0003676
Lan8g0820 983 Pfam PAZ domain 355 459 IPR003100 GO:0005515
Lan8g0820 983 MobiDBLite consensus disorder prediction 1 87 - -
Lan8g0820 983 SMART Piwi_a_2 617 938 IPR003165 GO:0003676
Lan8g0820 983 Pfam Argonaute linker 1 domain 277 326 IPR014811 -
Lan8g0820 983 ProSiteProfiles Piwi domain profile. 617 938 IPR003165 GO:0003676
Lan8g0820 983 MobiDBLite consensus disorder prediction 37 54 - -
Lan8g0820 983 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 57 982 - -
Lan8g0820 983 CDD Piwi_ago-like 487 937 IPR045246 -
Lan8g0820 983 MobiDBLite consensus disorder prediction 12 29 - -
Lan8g0820 983 CDD PAZ_argonaute_like 328 442 - -
Lan8g0820 983 SMART DUF1785_2 276 328 IPR014811 -
Lan8g0820 983 Pfam Argonaute linker 2 domain 469 515 IPR032472 -
Lan8g0820 983 SMART PAZ_2_a_3 333 465 IPR003100 GO:0005515
Lan8g0820 983 SUPERFAMILY Ribonuclease H-like 608 939 IPR012337 -
Lan8g0820 983 Pfam Piwi domain 618 937 IPR003165 GO:0003676
Lan8g0820 983 Gene3D paz domain 322 447 - -
Lan8g0820 983 PANTHER PROTEIN ARGONAUTE 10 57 982 - -
Lan8g0820 983 SUPERFAMILY PAZ domain 323 484 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0820 Lan-Chr8 10095139 10102927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0820 1 983 Eukaryotic Initiation Factors Gene Family AT5G43810 80.060 0.0 1637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0820 K11593 - gmx:100816999 1743.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0079 17 436619 438958 Lan8g0820 8 10095139 10102927 PCT