Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0806 ATGGGCTTTCTCCGGCGACTTTTCGGCGCCAAAAAACCAACTCAAGCCTCGGCTTCCAAATCCAGTAAGGAAAATAAAAGAAGATGGACCTTCTCCAAACACACCAACACTCATAATTCTCTTCCGCCACCATCCTCCTCCACCAACCACTTTCACTCTTCTTCCTCCTTGGACGCTACCAAGCATGCTATCGCCGTTGCTGCCGCTACCGCTGCCGTCGCTGAAGCAGCTATCGCTGCCGCTCATGCAGCCGCCGAGGTAGTTAGACTCACTAATAATAATACCAGGGCCACTACTACGACGGTGCATGTCAGCCGGAGGAGATGGGCGGAGGAAACTGCCGCCATTAAAATACAATCCTTGTTTCGCAGTTACTTGGCAAAGAGGGCGTTGAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCATTGGTGAGGGGACACATTGTGAGAAAGCAAACTGCAGATATACTCAGACGCATGCAAACATTGGTGCGATTGCAGTCCAAGGCACGTGCTACTCGTGTGCATTCATCAGATAATGTGTATTCTTTCAAGGCTTCACTTTCTCATTACCCTAGATGTAGTTCCAATGCAAATTTTAGGAACATCGACTCAGAGAGAAGGCAGCTTGATTCAAATTGGTTAGATCATTGGATGGAAGAAAATATGTGTAGCCAAACAAGAAATACTTTGAAAAATGGACACCTTGATGATGAGAAGAGTGACAAGATTCTTGAAGTAGATACTTGGAAGCCAAACTTCAAATCTCACCATGCTGGTGGTAGCTCCTTTCAGACATCACAACATTATTATAACTTGAGTTCTGATTACAACAATAATAATAAGAGCTTTATGGCATACGAGTCTTCTCCGTCAAAACGTTCAACTAAAGCACTTAATCAAAGTCTGTCATCAAGGGAGGTGTTACAGTTAAGCTCTTTGAAGTTAAACAAAGGAAAAGAAGAGTTAGCTTCAAGAACAAGTAATAATAGTCCACAAACATTTTCCGCCTCTTCCAAAAGTGGTGCAAGGAGAGGACCATTTACTCCTACAAGAAGTGAGTGTTCATGGGGTTACTTCAATGGGTACATGGGTTACCCCAATTACATGGCAAACACTGAATCTTCTAGAGCTAAGGTTAGATCACAAAGTGCACCAAGGCAAAGGTTGGAGTTTGATAGATATGGTTCTAGTTCTACCAAGAGGTTTGTTCAGGGTCTTTGGGATGTAGGGCCTAATAATTCAGACAGTTATTCTGATTTATGA 1266 0.4344 MGFLRRLFGAKKPTQASASKSSKENKRRWTFSKHTNTHNSLPPPSSSTNHFHSSSSLDATKHAIAVAAATAAVAEAAIAAAHAAAEVVRLTNNNTRATTTTVHVSRRRWAEETAAIKIQSLFRSYLAKRALRALKALVKLQALVRGHIVRKQTADILRRMQTLVRLQSKARATRVHSSDNVYSFKASLSHYPRCSSNANFRNIDSERRQLDSNWLDHWMEENMCSQTRNTLKNGHLDDEKSDKILEVDTWKPNFKSHHAGGSSFQTSQHYYNLSSDYNNNNKSFMAYESSPSKRSTKALNQSLSSREVLQLSSLKLNKGKEELASRTSNNSPQTFSASSKSGARRGPFTPTRSECSWGYFNGYMGYPNYMANTESSRAKVRSQSAPRQRLEFDRYGSSSTKRFVQGLWDVGPNNSDSYSDL* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0806 421 PANTHER IQ-DOMAIN 5-RELATED 1 417 - -
Lan8g0806 421 SMART iq_5 110 132 IPR000048 GO:0005515
Lan8g0806 421 SMART iq_5 133 154 IPR000048 GO:0005515
Lan8g0806 421 MobiDBLite consensus disorder prediction 34 54 - -
Lan8g0806 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 154 IPR027417 -
Lan8g0806 421 Pfam Protein of unknown function (DUF4005) 332 390 IPR025064 -
Lan8g0806 421 MobiDBLite consensus disorder prediction 320 349 - -
Lan8g0806 421 Pfam IQ calmodulin-binding motif 114 132 IPR000048 GO:0005515
Lan8g0806 421 Pfam IQ calmodulin-binding motif 135 152 IPR000048 GO:0005515
Lan8g0806 421 PANTHER CALMODULIN-BINDING PROTEIN 1 417 - -
Lan8g0806 421 MobiDBLite consensus disorder prediction 1 54 - -
Lan8g0806 421 Gene3D - 110 153 - -
Lan8g0806 421 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Lan8g0806 421 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Lan8g0806 421 MobiDBLite consensus disorder prediction 323 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0806 Lan-Chr8 10018978 10023231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0806 1 408 IQD Protein Family AT5G62070 46.313 1.24e-66 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0806 - - gmx:100785181 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0927 7 8822559 8827795 Lan8g0806 8 10018978 10023231 PCT
Lan13g0775 13 7983708 7990016 Lan8g0806 8 10018978 10023231 PCT
Lan8g0806 8 10018978 10023231 Lan7g0927 7 8822559 8827795 PCT
Lan8g0806 8 10018978 10023231 Lan13g0775 13 7983708 7990016 PCT