Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0805 ATGCATTTCAAAAGTCAGCCAAGGAAAATGGAGGGCCATACTGACATGGGTCTCATTTGTGAAAACTTCGATACTGGTTTGACGGGGAGGATGAGGGATGATGAGTATGAAAGCCGTTCAGGAAGCGATAATTTTGATGGCGCCTCTGGTGATGATCAGGATGCTGGTGATGGTCATCCAAAGAGGAAAAAGAGATATCATAGACACACTCCTCACCAAATTCAAGAGCTTGAATCTTTCTTCAAGGAGTGTCCCCATCCCGATGAGAAGCAAAGGTTGGATCTTAGTAAGAGGCTGAGCCTGGAGAATAAGCAAGTCAAATTCTGGTTTCAGAATCGAAGAACCCAAATGAAGACCCAACTGGAACGCCACGAGAACATAATGCTTAGACAGGAAAATGAGAGGCTTAGAGCTGAGAACAATATGATAAAAGATGCCATGTCAAACCCAGTATGTAACAGTTGTGGTGGCCCAGCCCTTCCTGGCCAAATTTCATTCGAGGAGCACCAGATTAGAATTGAAAATGCTCGACTAAAGGATGAATTGACTCGTATAGTTTCCTTAACAAACAAGTTTCTTGGCAAGCCGATCTCATCATTGAGCAGTCCGATGTCTCTCTCCGCTGCAAATTCTGGCCTAGAACTTGGAATTGGAATGAAGGGGATTGGTGGTTCAAGCAATGTCGGCACTCCCTTACCAATGGGACTTGATTTTGGAGATGGAGTCTTGACCTCTCCACCTGCAATACCTGGGATTAGATCACCAATGGGATTGTTGGGAAATGATGCACAACTTGAGAGATCTATATTTATAGACCTTGCATTGGCCGCGATGGAGGAATTAATAAAGATGGCTCAAGCAGATAGCCCTCTTTGGATTAAGAGTTTGGATGGCGAGAAGGAAGTGCTGAACCATGAGGAGTATGCAAGGTTGTTTTCTCCAAAACCTGCTGGTTATGCAACTGATGCTACAAGAGAAACTGGGATAGTAATCATTAACAGTTTAGCGCTAATCGAAACATTGATGGACGCGAATCGATGGGCGGAGATGTTTCCATCTATTATTGCTAGAGCTGTGCCCCTTGATGTTATAACTAACGGCATGGGTGGAACCAGAAATGGCGCTTTACTATTGATGCATTCTGAGGTTCAATTGCTTTCACCACTTGTTCCCATTCGTCAAGTGCGATTCCTTCGGTTCTGTAAGCAGCATGCAGAAGGTGTATGGGCTGTGGTCGATGTTTCTGTTGAGATTGGCCGAGATGCTGCCAACACACAGTTCATGACCTGTAGGAGGCTTCCTTCCGGCTGTGTTGTGCAGGATATGCCCAATGGTTACTCCAAGGTTACTTGGGTTGAGCATTGGCAGTACGATGAGAGTGTTGTGCACCAACTCTATCGCCCATTGCTTAATTCTGGCATTGGGTTCGGAGCTCATCGCTGGATCGCTACGCTCCAAAGACAGTGTGAATGCTTGGCGATCCTCATGTCCTCTATCACAAGTGATGATCACACAGCTTTGAGCCAGGCTGGCCGAAGAAGCATGCTGAAGCTGGCACAACGCATGACCAGTAACTTCTGTTCTGGGGTTTGTGCTTCATCGGCTCGCAAGTGGGAAAGCCTTCCTGTGGGAACTTTGGGTGATGACATGAGGGTGATGACAAGGAAGAATGTTGACGATCCAGGTGAGCCTCCTGGGATTGTGCTTAGTGCTGCAACTTCTGTTTGGATGCCGGTGTCACAGCAAAGGCTGTTCAACTTTCTGCGCAACGAACAACTCCGAAGTGAGTGGGATATTTTGTCAAATGGTGGACCAATGCAGGAGATGGTTCACATTGCCAAAGGACAAGGACATGGAAATTGTGTTTCTCTCCTTCGTGCTAGTGCCGTTAATGCCAATGATAGCAGCATGCTGATTCTACAAGAAACATGGACGGATTCTTCGTGCTCGGTAGTAGTATATGCACCAGTTGACGTGCAATCCTTGAATGTGGTGATGAGTGGCGGAGATTCAGCATATGTTGCACTCTTGCCTTCCGGCTTTGCCATCCTTCCTGACTGTCAATCCTCCAGGTATAGCACGTCGAACAACAGTTGCAATGGGAATATACCGAAGGGCGGTGGCGGCAAGGATGAAGGTGGAAGCTTGCTGACGGTCGGGTTCCAAATTCTGGTGAATAACCTCCCGACAGCGAAGCTGACAATGGAATCGGTTGATACAGTGAATAACCTCATATCATGCACTATTCAGAAGATAAAAGGTGCCCTCAGAGTTGCATGA 2280 0.4675 MHFKSQPRKMEGHTDMGLICENFDTGLTGRMRDDEYESRSGSDNFDGASGDDQDAGDGHPKRKKRYHRHTPHQIQELESFFKECPHPDEKQRLDLSKRLSLENKQVKFWFQNRRTQMKTQLERHENIMLRQENERLRAENNMIKDAMSNPVCNSCGGPALPGQISFEEHQIRIENARLKDELTRIVSLTNKFLGKPISSLSSPMSLSAANSGLELGIGMKGIGGSSNVGTPLPMGLDFGDGVLTSPPAIPGIRSPMGLLGNDAQLERSIFIDLALAAMEELIKMAQADSPLWIKSLDGEKEVLNHEEYARLFSPKPAGYATDATRETGIVIINSLALIETLMDANRWAEMFPSIIARAVPLDVITNGMGGTRNGALLLMHSEVQLLSPLVPIRQVRFLRFCKQHAEGVWAVVDVSVEIGRDAANTQFMTCRRLPSGCVVQDMPNGYSKVTWVEHWQYDESVVHQLYRPLLNSGIGFGAHRWIATLQRQCECLAILMSSITSDDHTALSQAGRRSMLKLAQRMTSNFCSGVCASSARKWESLPVGTLGDDMRVMTRKNVDDPGEPPGIVLSAATSVWMPVSQQRLFNFLRNEQLRSEWDILSNGGPMQEMVHIAKGQGHGNCVSLLRASAVNANDSSMLILQETWTDSSCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDCQSSRYSTSNNSCNGNIPKGGGGKDEGGSLLTVGFQILVNNLPTAKLTMESVDTVNNLISCTIQKIKGALRVA* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0805 759 SUPERFAMILY Bet v1-like 266 491 - -
Lan8g0805 759 Coils Coil 114 149 - -
Lan8g0805 759 CDD homeodomain 62 120 IPR001356 GO:0003677
Lan8g0805 759 Pfam START domain 273 491 IPR002913 GO:0008289
Lan8g0805 759 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
Lan8g0805 759 Gene3D - 50 136 - -
Lan8g0805 759 Pfam Homeodomain 63 118 IPR001356 GO:0003677
Lan8g0805 759 MobiDBLite consensus disorder prediction 28 70 - -
Lan8g0805 759 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Lan8g0805 759 SUPERFAMILY Bet v1-like 518 753 - -
Lan8g0805 759 SUPERFAMILY Homeodomain-like 48 120 IPR009057 -
Lan8g0805 759 CDD START_ArGLABRA2_like 267 490 - -
Lan8g0805 759 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 11 757 - -
Lan8g0805 759 SMART START_1 272 491 IPR002913 GO:0008289
Lan8g0805 759 ProSiteProfiles START domain profile. 263 494 IPR002913 GO:0008289
Lan8g0805 759 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 11 757 IPR042160 -
Lan8g0805 759 SMART HOX_1 61 124 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0805 Lan-Chr8 10008588 10014720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0805 32 756 Homeobox Transcription Factor Family AT3G61150 62.008 0.0 899
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan8g0805 START 2.9e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0805 K09338 - gmx:100785102 1276.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0805 8 10008588 10014720 Lan20g0044 20 225206 231146 LSH