Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0797 ATGGTGAGTGAGAGACAGCGTGTTGCTCGAAAGCGATTCAAATCAGAGCACCCTGAACTCTTTCCCAAACCTGAACCCACTCCTCCTAAGGACACTGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAACAACACACCAGAACAACTCGGCGTCACTACTAAACCCTTCAAATCCAATTCCAGAAAACATCCTCTGAGAGTCCCTGGTATGAAGCCTGGTGAAAGCTGTTTCATATGCAAGGCCAAAGACCACATCGCTAAGTCTTGTCCTGAAAAGGCTCTCTGGGAGAAAAACAAGATATGTTTGCGGTGTAGACGCCGTGGTCATCGAGCCACGAATTGCCCTGAGCTGCAACATGGAACCAATGATGACAAATACTGTTATAATTGTGGTGAAAATGGACACTCCCTTGCATATTGTCCATACCCTCTTCAACAAGGAGGGACAAAGTTTGCTGAGTGTTTCGTTTGTAAGCAACGTGGACACTTGAGTAAAGACTGCCCTCAAAATGCTCATGGTATTTATCCAAAGGGTGGCTGTTGCAAAATATGTGGTGGTGTGACACATTTGGCAAAGGATTGTCCTGACAAAGGGAGGCAAGGATCTGTTGCTGCCAATGGGCCTTATAATAGATTAATAGGAGCTGGTGTGAGGGCCACTGGTCAGGTTACCAAATTTGTGAGTGGGGATGATATCGATGATGATTTCGTGACAGATGACATAAATAGTGGCGACAAGAACAACTCTTCAAAGTCGAATGAGGGCGATGTAAAACCAAAGAAGGGTCCTAAAGTTGTAGTGTTTAACTGA 819 0.4457 MVSERQRVARKRFKSEHPELFPKPEPTPPKDTEKKKKKKKKKKKKNNTPEQLGVTTKPFKSNSRKHPLRVPGMKPGESCFICKAKDHIAKSCPEKALWEKNKICLRCRRRGHRATNCPELQHGTNDDKYCYNCGENGHSLAYCPYPLQQGGTKFAECFVCKQRGHLSKDCPQNAHGIYPKGGCCKICGGVTHLAKDCPDKGRQGSVAANGPYNRLIGAGVRATGQVTKFVSGDDIDDDFVTDDINSGDKNNSSKSNEGDVKPKKGPKVVVFN* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0797 272 MobiDBLite consensus disorder prediction 241 272 - -
Lan8g0797 272 SMART c2hcfinal6 183 199 IPR001878 GO:0003676|GO:0008270
Lan8g0797 272 SMART c2hcfinal6 103 119 IPR001878 GO:0003676|GO:0008270
Lan8g0797 272 SMART c2hcfinal6 129 145 IPR001878 GO:0003676|GO:0008270
Lan8g0797 272 SMART c2hcfinal6 78 94 IPR001878 GO:0003676|GO:0008270
Lan8g0797 272 SMART c2hcfinal6 156 172 IPR001878 GO:0003676|GO:0008270
Lan8g0797 272 ProSiteProfiles Zinc finger CCHC-type profile. 130 144 IPR001878 GO:0003676|GO:0008270
Lan8g0797 272 MobiDBLite consensus disorder prediction 1 70 - -
Lan8g0797 272 Pfam Zinc knuckle 157 172 IPR001878 GO:0003676|GO:0008270
Lan8g0797 272 Gene3D - 124 176 - -
Lan8g0797 272 MobiDBLite consensus disorder prediction 1 32 - -
Lan8g0797 272 SUPERFAMILY Retrovirus zinc finger-like domains 72 121 IPR036875 GO:0003676|GO:0008270
Lan8g0797 272 Gene3D - 72 123 - -
Lan8g0797 272 ProSiteProfiles Zinc finger CCHC-type profile. 104 119 IPR001878 GO:0003676|GO:0008270
Lan8g0797 272 SUPERFAMILY Retrovirus zinc finger-like domains 123 174 IPR036875 GO:0003676|GO:0008270
Lan8g0797 272 PANTHER OS04G0555800 PROTEIN 1 272 - -
Lan8g0797 272 ProSiteProfiles Zinc finger CCHC-type profile. 157 172 IPR001878 GO:0003676|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0797 104 200 C2H2 Transcription Factor Family AT5G20220 31.034 3.35e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0797 - - lang:109354628 488.419