Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0793 ATGGTTCATGTCATAATAGAGGATGCTGGTAGTTCCAAAGACTTGACAAATTTGTGTCCTTCAGTAGCAGAAGCCATTTTGGAGGATATGGTTCCAGAAGCGTGTGGGACTAATCTGCCATGCTCGGATTCGGTTCCAAAGCAAAGCTTGCATACTCTTAATAACAAAGTGACACCTTTTGCAGCTAGGAAACAATCGAACAGTGTGACTATTAAGGCAACATATAAACAAGATATCATAAGGTTCCGGGTCTCTTTGAGTTGTAGTGTTGTGGATTTGAGAGAAGAAGTTGGCAAGAGATTGAAATTAGAAGTTGGTACATATGATATCAAGTACCTGGATGGTGATAATGAATGGGTTTTGATAGCCTGTGATGCAGATCTGCAGGAGTGCATTGATGTTTCAAGATCATCAGGAAGCAACATTATCAGGTTTTGGTGCAAGATACAGTGTCCAATCTTGGAAGCTCTTGTGAAAGCACAGGGGAGTAGGGTGATCATATCATATATAGGACAACTTTGTACACAAATATTTAGGTTATTGTGGTCTTAG 552 0.4004 MVHVIIEDAGSSKDLTNLCPSVAEAILEDMVPEACGTNLPCSDSVPKQSLHTLNNKVTPFAARKQSNSVTIKATYKQDIIRFRVSLSCSVVDLREEVGKRLKLEVGTYDIKYLDGDNEWVLIACDADLQECIDVSRSSGSNIIRFWCKIQCPILEALVKAQGSRVIISYIGQLCTQIFRLLWS* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0793 183 Pfam PB1 domain 69 148 IPR000270 GO:0005515
Lan8g0793 183 SMART PB1_new 68 150 IPR000270 GO:0005515
Lan8g0793 183 Gene3D - 64 147 - -
Lan8g0793 183 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 5 160 - -
Lan8g0793 183 PANTHER PROTEIN NLP8 5 160 IPR045012 GO:0003700
Lan8g0793 183 ProSiteProfiles PB1 domain profile. 68 150 IPR000270 GO:0005515
Lan8g0793 183 CDD PB1_NLP 69 145 IPR034891 -
Lan8g0793 183 SUPERFAMILY CAD & PB1 domains 64 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0793 Lan-Chr8 9965874 9966462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0793 4 145 NLP Transcription Factor Family AT4G24020 48.951 8.77e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0793 - - lang:109354631 369.007