Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0791 ATGGGTAGTGTTGGAGCTGCAGCAATGGATGACACTGTCTATGTTGCTGTCGGGAACAACGTTAATAAGACCAAACAACTATTGTACTGGACCATTCACACTTTCTCTGCCAGACCAATTTGTCTCCTTCATGTTCACCAACCTTATTCGACCAATTCCTTCAACAGGAACCTCTCTGCAATTGAACCAAGTGACCATGCAATCAAGGCATTCCAGGAGCAAGGGAGTAAACAAGTGCATGAACTCCTAGACCAATATATTTTCATCCTTAAAAAGCTAAAAGTAAAGGCCAAGGTATTGTTGATTGATAAGGATGATATTGAGAAAGGGATTGCAGAAGCTATTGCTCAACACAATATTAGATGGCTTGTAATGGGAGAAGCAGCAGATAAATCTAATTCGGGTGAACTGGTTGAGCAAGAGTCCGAGAAAGCTATTATTGTACGTGAACAGGCATTCCTGTCCTGTAATATATGGCTCATTTGCAAAGGCGAACCCACACGTACTAGGGTAGATGGTGAACATACATCTGAAGTAGAGACTGCCCCTCAATTGTCGGTCCTCAATTCAAAAACAGAAGCCATACAATCAGAGATGATAAATTCAGAATTGAATCCTAATGCATTGAAATATTCAGGTTGTGCAGATTCTGGTGATACGGAAGAGACTGGAAATGTCAGTTCTCAGTGTTCATTACAATCAAAGTGGTCCTTAAGTAGTTTTGTTCGAAGGTCAAAGTTAACAGATTTTCTGTTTCATGAGGAGGAAAAAGATGAAGGGGAGCTATCAAGTGAAATAGATGGTAGAGTGGAAGAAACCATCATAGATGCTAAGAGCATGAGACAAAAAGAATTTGGAGTGGTGTTAAAGAGATGGAAAGTGGATAGCAGTACTTTGGAGGATAAAGAATTAGAAAGCCTGTGTGCTAAGGAGATAAGTAGAAGAAAAGAAGTTGAAGAACAAATAGTCAGGGTAAAACAACAAGTACAGGAAATGAAGAATCAGCAAGATGAAATAATGCATGAATTGCAGATGGTCCAAGACCGAAAGTCAACACTTAAGAACCAACTTTCTGAGTCCCAATGTACAGTGACAGAGTTGGAAGAGAAGATCATATCAGCTGTGGACCTCTTGATAAGCTTCAGGGAAAAACGAGATATGCTAAGGATAGAGCATAAAAATGCAGTTAGGAAAGTCAAAGTGCTGAAGGAATTCAGAGAAGCGGATACTAGATTGTCTTATAGGGTTGAATTCCCTGCATTTTCTTTTATAGAGATCAATGAGGCAACTAATGATCTTGACCCATCCTGGAAGATTGGAGAGGGAAGGTACGGAAGTGTTTATAAAGGTTTGCTTTGCAACATGCATGTTGCCATAAAAATGTTACCCTCTTATGGAAGTCAGAGCCAATTGGAGTTCCAACACCAGGTGGAGATTTTGAGTCGGGTTAGACATCCAAACCTGTTAACACCAATTGGAAGCTGTGTAGAGTCTAGGTCACTGGTGTACGAGTACCTAAACAATGGCAGCCTTGAAAGCCATCTTGTCCGCAAAGACAAGACTTCACTTCCATGGCAAATTCGAGTATCAATTGCTGCTAACATATGCTCTGCTCTTATCTTCCTTCACTGCAATGATCCTTGTATTATCCATGGGAATTTGAAACCGAGCAAGGTTCTCCTTGATGCTAACTTTGTTGCCAAACTTAGTGACGTGGGCATTCCTTCTTTATTCCAGTGTAGTGTGGATTCAGCGGTCACGACCACAGCATGTAGGAACAAGAATGAAAGTATGGCGTATGTGGATCCAGAGTATCTTGTTACTAGCAAGCTTACACCAGAATCAGATGTGTATTCATTTGGGGTCATATTGTTACAACTTCTAACAGGAAGACCACTTTTTGGGCTAGTTAGAGACATGAAGTGTGCATTGGAAAAGGACAACCTAAAATCAGTGTTGGACTTTTCTGCTGGGGAGTGGCCGCTATATCAAACTAAACAGCTGGCTTGTCTAGCATTGAGGTGTTGTGAAAAGACTTGGTTGAACAGGCCGGACCTTGTGTCGGAAATCTGGAGTGTTCTTGAACCATTCAGAACTACTTGCATCAACATGCCACCATATTTGGCTTCTAAGAAGCCTCACCACCCTCCTCCTCCGCATTTTCTCTGCCCCATTGTCCAGGAAGTAATGGAAGAACCATACATAGCAGCAGATGGGTATACATATGAAGCAGAGGCAATAAAAGAATGGTTGAATAGTGGTCACAACACTTCCCCCATGACAAACCTTAAACTTGAACACACAGATTTGGTGCCTAACTATGTGCTACATAATGCAATTCAGGAGTGGCAGCAACTAATATGA 2364 0.4137 MGSVGAAAMDDTVYVAVGNNVNKTKQLLYWTIHTFSARPICLLHVHQPYSTNSFNRNLSAIEPSDHAIKAFQEQGSKQVHELLDQYIFILKKLKVKAKVLLIDKDDIEKGIAEAIAQHNIRWLVMGEAADKSNSGELVEQESEKAIIVREQAFLSCNIWLICKGEPTRTRVDGEHTSEVETAPQLSVLNSKTEAIQSEMINSELNPNALKYSGCADSGDTEETGNVSSQCSLQSKWSLSSFVRRSKLTDFLFHEEEKDEGELSSEIDGRVEETIIDAKSMRQKEFGVVLKRWKVDSSTLEDKELESLCAKEISRRKEVEEQIVRVKQQVQEMKNQQDEIMHELQMVQDRKSTLKNQLSESQCTVTELEEKIISAVDLLISFREKRDMLRIEHKNAVRKVKVLKEFREADTRLSYRVEFPAFSFIEINEATNDLDPSWKIGEGRYGSVYKGLLCNMHVAIKMLPSYGSQSQLEFQHQVEILSRVRHPNLLTPIGSCVESRSLVYEYLNNGSLESHLVRKDKTSLPWQIRVSIAANICSALIFLHCNDPCIIHGNLKPSKVLLDANFVAKLSDVGIPSLFQCSVDSAVTTTACRNKNESMAYVDPEYLVTSKLTPESDVYSFGVILLQLLTGRPLFGLVRDMKCALEKDNLKSVLDFSAGEWPLYQTKQLACLALRCCEKTWLNRPDLVSEIWSVLEPFRTTCINMPPYLASKKPHHPPPPHFLCPIVQEVMEEPYIAADGYTYEAEAIKEWLNSGHNTSPMTNLKLEHTDLVPNYVLHNAIQEWQQLI* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0791 787 CDD RING-Ubox_WDSUB1_like 721 762 - -
Lan8g0791 787 ProSiteProfiles U-box domain profile. 716 787 IPR003613 GO:0004842|GO:0016567
Lan8g0791 787 ProSiteProfiles Protein kinase domain profile. 433 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0791 787 CDD STK_N 12 164 - -
Lan8g0791 787 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 32 8 786 - -
Lan8g0791 787 Gene3D Phosphorylase Kinase; domain 1 402 505 - -
Lan8g0791 787 Pfam Protein tyrosine and serine/threonine kinase 438 686 IPR001245 GO:0004672|GO:0006468
Lan8g0791 787 Gene3D HUPs 6 128 IPR014729 -
Lan8g0791 787 ProSitePatterns Protein kinases ATP-binding region signature. 439 460 IPR017441 GO:0005524
Lan8g0791 787 SMART Ubox_2 720 783 IPR003613 GO:0004842|GO:0016567
Lan8g0791 787 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 717 786 IPR013083 -
Lan8g0791 787 SUPERFAMILY RING/U-box 714 784 - -
Lan8g0791 787 Pfam U-box domain 718 784 IPR003613 GO:0004842|GO:0016567
Lan8g0791 787 PANTHER OS02G0152300 PROTEIN 8 786 - -
Lan8g0791 787 Gene3D Transferase(Phosphotransferase) domain 1 506 701 - -
Lan8g0791 787 Coils Coil 308 370 - -
Lan8g0791 787 SUPERFAMILY Protein kinase-like (PK-like) 410 695 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0791 Lan-Chr8 9953298 9959617 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0791 41 784 U-box Gene Family AT3G49060 43.247 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lan8g0791 PK_Tyr_Ser-Thr 2.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0791 - - gmx:100787938 1036.94