Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0771 ATGTCATTTTGGTGGTTGAACTCATTGATGAAAAGGGGTAAAAAGAAGTCACTCCAAGAGGAAGATATCCCAAAGTTGCGGGAGGATGATCGAGCAGAGAGCTGTTATTTGTTGTTTCTAGACCAGTTGAACGGGCATAAACAGAAAGACCCGTCGTCGCAACCATCAGTTTTGAGGATAATAGTTTTATGCCACTTGAGACAGATTTTGATATCAGGATTCTTTGCGTTGCTTAAGGTACTGGCTGTGTGTTGTGGTCCTTTGCTTCTGAATTCGTTTATATTGGTTGCTCAGGGTGACGGGAGTTTCAAGTATGAAGGTTTTATATTGGCCATATCACTTTTCTTTATAAAGATCATAGAATCTTTGTCACAGAGGCAGTGGTATTTTCGTTCTAGACTTATTGGTCTTAAAGTTAGGTCACTACTAACTGCAGCCATTTATAAAAAGCAACTTAGACTATCCAATTCTGCTAGATTGACGCACTCCGGTGGTGAGATAATGAATTATGCGACCGTGGATGCTTATAGAATTGGAGAATTTCCCTATTGGTTTCACCAGACTTGGACAACAAGCGTCCAACTATGTATCTCATTAGTAGTACTTATTAATGCTGTTGGGCTAGCGACGATTGCATCGCTGGTAGTGGTAGTTATCACTGTGCTTTGCAATACTCCACTCGCAAAGTTACAGCACAAGTTTCAAACCAAACTTATGGTGGCACAAGATGCGAGATTGAAGGCTATTTCTGAGGCTCTAATGAATATGAAGGTACTGAAGTTGTATGCATGGGAAACCAATTTTAAAAAGTCTATAGAAGCATTGCGGAATGTTGAGGCCAAATGGTTGTCAGCGGTGCAATTGCGAAAGGCATACAACACCTTTCTCTTTTGGTCCTCACCTGTTTTGGTCTCAGCTGCTACCTTTGGGGCATGTTACTTTCTTAATGTCCCTTTACGTGCAAACAATGTTTTCACTGTTGTAGCTTCTTTGCGCCTTGTTCAAGATCCTATTAGAACAATCCCTGATGTTGTTGGGGTGGTGATTCAAGCAAAAGTTGCATTTTCCAGGATTACAAAATTCTTGGAGGCACCTGAATTGCAGAACACAAATGCCAAGAAGAGGTGTTTTAATGACAATGTTACGGGCTCAATTTTAATCAAGTACGCCGACTTTTCATGGGAAGATAATGTATCACAGCCAACATTGAAACACATAAATTTGGAGGTTAGACCAGGGCAAAAGGTTGCAATTTGTGGAGAGGTTGGCTCAGGCAAATCAACCCTTTTAGCAGCAATTCTCAGAGAAGTTCCTAATACTCAGGGGGCTATTGAAGTTTACGGGAAGTTTGCCTACGTTTCTCAAACAGCATGGATACAGACAGGTACAATACAAGAAAATATACTGTTTGGATCAGATATGGATCCTCAAAGATATCAAGAAACACTTCATAGGTCTTCACTAGTGAAGGACCTTGAATTATTTTCCCATGGCGACCTCACGGAAATAGGGGAGAGAGGGGTTAACCTGAGCGGAGGTCAGAAACAGCGGATTCAACTTGCTCGTGCTCTTTATCAAAATGCCGATATATATCTCTTGGATGATCCATTTAGTGCTGTTGATGCACAAACAGCCACAAGTTTATTTAATGAATACGTCATGGAAGGACTTGCAGGGAAGACAGTCTTGCTTGTGACACATCAAGTTGACTTCCTTCCAGCATTTGACACTGTTTTGTTGATGTCGGAAGGGAAAATTCTGGAAGCTGCTTCTTATCACCATCTGTTGACCTCAAGCAAAGAATTTCAGGATCTTGTCAATGCACACAAAGAAACTGCCGGTTCTAACCGTCTTGTGGATGTCACTTTTTCCCATAGACCTTCAAATAATGCCGGAGAAATTAAGAAAACATATATGGAACATCAGCTTGAAGCATCACAAGGCGATCAACTAATTAAGAAAGAAGAGAGGGAAAAAGGAGACCAAGGGTTCAAGCCTTATTTACAGTATCTGAATCAGGATAGAGGATATATGTACTTTTCTGTGGGTGCTATTTCTCACCTTATATTTGTCATTGGCCAGATATTGCAAAACTCATGGATGGCTGCTTATGTTGACAATCCTGAAGTCAGCACTTTGCGATTAATTTTAGTATACTTGTTGATTGGAGTTGTTTCGACAATGTTTTTGTTGACCCGAAGTCTTGTAATAGTTGCTTTGGGCATTCATTCATCAAAATCCTTATTTTTACAGCTACTGAACTCCCTCTTTCACGCGCCCATGTCGTTTTATGACTCCACACCTTTGGGTCGGATACTTAGTAGGGTCTCTTCAGATCTCAGCATTGTCGATCTTGATGTCCCATTTGGCTTTATTTTTGCCGTTGGAGCTACTATTAATTGTTATGCTAACCTTACAGTTTTAGCAGTTGTTACTTGGCAAGTGTTGTTTGTGTCTATTCCGACGATTTATTTTGCAATTCGCTTGCAGAAATATTACTTTGCCACTGCAAAAGAATTGATGCGCATCAATGGCACAACAAAATCGTATGTAGCTAATCATCTTGCTGAATCTGTTGCTGGAGCTTTGACAATACGGGCTTTTGAGGAGGAAGATCGTTTTTTCTTGAAGAATCTTGATCTAATTGATGTTAATGCTAGTCCTTACTTTCACAGTTTTGCTGCAAATGAGTGGTTGATTCAGCGTTTAGAAACAGTCAGTGCAGTTGTTCTTGCATCTGCGGCACTTTGCATTGTTGTACTTCCACCTGGAACTTTCTCATCTGGTTTTATTGGCATGGCTCTCTCATATGGCCTTTCACTTAATTTGTCCCTAGTATTTTCAATTCAAAATCAATGCAATATAGCAAATTATATAATCTCAGTGGAGAGGCTAAATCAATATATGCATATACCAAGTGAGGCACCAGAAGTAATAGACGGAAATCGTCCTCCAGTGAGTTGGCCAGTCGTGGGAAAAGTCGAAATACATGATTTGCAGATACGATACAGGCCTGATGCACCTCTTGTAATCCGTGGCATCACATGCACATTTGAAGGAGGGCACAAGATTGGTATTGTTGGCAGGACAGGTAGTGGGAAGTCTACTCTTATAGGTGCTTTATTCCGTCTGGTGGAGCCATCAGGTGGAAAAATCGTAGTTGACGGCATAGACATTGCTTCGATTGGACTTCATGATTTGAGGTCACGCTTAGGTATCATACCTCAGGATCCTACTCTTTTTAATGGCACAGTCAGATACAATATGGACCCTTTATCTCAACACTCTGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAATTGCAAGAGGTTGTCCAAGAGAAAGAAGAGGGTTTAGACTCATCGGTTGTGGAAGCTGGAGCAAACTGGAGCATGGGACAACGACAGTTATTCTGCTTGGGGCGTGCTCTTTTGAGGAGAAGTCGAGTATTGGTTCTCGATGAAGCAACTGCGTCAATTGATAATGCAACAGATCTGATTCTGCAGAAAACCATTAGGAGTGAGTTTGCAGATTGTACAGTGATCACAGTTGCTCATAGGATACCAACTGTGATGGATTGTACAAAGGTTCTTGCTATTAGTGATGGAAAACTTGTAGAGTATGATGAACCGACGAACTTGATGACGAGAGAAGGGTCGTTATTTGGGCAGCTTGTGAAGGAATACTGGTCTCATTTTCAGTCTGCAGATTCACATTGA 3723 0.411 MSFWWLNSLMKRGKKKSLQEEDIPKLREDDRAESCYLLFLDQLNGHKQKDPSSQPSVLRIIVLCHLRQILISGFFALLKVLAVCCGPLLLNSFILVAQGDGSFKYEGFILAISLFFIKIIESLSQRQWYFRSRLIGLKVRSLLTAAIYKKQLRLSNSARLTHSGGEIMNYATVDAYRIGEFPYWFHQTWTTSVQLCISLVVLINAVGLATIASLVVVVITVLCNTPLAKLQHKFQTKLMVAQDARLKAISEALMNMKVLKLYAWETNFKKSIEALRNVEAKWLSAVQLRKAYNTFLFWSSPVLVSAATFGACYFLNVPLRANNVFTVVASLRLVQDPIRTIPDVVGVVIQAKVAFSRITKFLEAPELQNTNAKKRCFNDNVTGSILIKYADFSWEDNVSQPTLKHINLEVRPGQKVAICGEVGSGKSTLLAAILREVPNTQGAIEVYGKFAYVSQTAWIQTGTIQENILFGSDMDPQRYQETLHRSSLVKDLELFSHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAQTATSLFNEYVMEGLAGKTVLLVTHQVDFLPAFDTVLLMSEGKILEAASYHHLLTSSKEFQDLVNAHKETAGSNRLVDVTFSHRPSNNAGEIKKTYMEHQLEASQGDQLIKKEEREKGDQGFKPYLQYLNQDRGYMYFSVGAISHLIFVIGQILQNSWMAAYVDNPEVSTLRLILVYLLIGVVSTMFLLTRSLVIVALGIHSSKSLFLQLLNSLFHAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFGFIFAVGATINCYANLTVLAVVTWQVLFVSIPTIYFAIRLQKYYFATAKELMRINGTTKSYVANHLAESVAGALTIRAFEEEDRFFLKNLDLIDVNASPYFHSFAANEWLIQRLETVSAVVLASAALCIVVLPPGTFSSGFIGMALSYGLSLNLSLVFSIQNQCNIANYIISVERLNQYMHIPSEAPEVIDGNRPPVSWPVVGKVEIHDLQIRYRPDAPLVIRGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPSGGKIVVDGIDIASIGLHDLRSRLGIIPQDPTLFNGTVRYNMDPLSQHSDQEIWEVLGKCQLQEVVQEKEEGLDSSVVEAGANWSMGQRQLFCLGRALLRRSRVLVLDEATASIDNATDLILQKTIRSEFADCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPTNLMTREGSLFGQLVKEYWSHFQSADSH* 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0771 1240 CDD ABCC_MRP_domain2 992 1212 - -
Lan8g0771 1240 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 387 608 IPR003439 GO:0005524
Lan8g0771 1240 Pfam ABC transporter 403 537 IPR003439 GO:0005524
Lan8g0771 1240 Pfam ABC transporter 1013 1159 IPR003439 GO:0005524
Lan8g0771 1240 Gene3D - 381 614 IPR027417 -
Lan8g0771 1240 Gene3D - 978 1229 IPR027417 -
Lan8g0771 1240 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 682 957 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan8g0771 1240 CDD ABCC_MRP_domain1 385 585 - -
Lan8g0771 1240 Gene3D ABC transporter type 1, transmembrane domain 44 367 IPR036640 GO:0005524|GO:0016021
Lan8g0771 1240 Gene3D ABC transporter type 1, transmembrane domain 642 975 IPR036640 GO:0005524|GO:0016021
Lan8g0771 1240 SUPERFAMILY ABC transporter transmembrane region 666 980 IPR036640 GO:0005524|GO:0016021
Lan8g0771 1240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 379 608 IPR027417 -
Lan8g0771 1240 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 994 1228 IPR003439 GO:0005524
Lan8g0771 1240 ProSitePatterns ABC transporters family signature. 510 524 IPR017871 GO:0005524
Lan8g0771 1240 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 2 1240 - -
Lan8g0771 1240 SUPERFAMILY ABC transporter transmembrane region 58 363 IPR036640 GO:0005524|GO:0016021
Lan8g0771 1240 SMART AAA_5 412 585 IPR003593 -
Lan8g0771 1240 SMART AAA_5 1020 1212 IPR003593 -
Lan8g0771 1240 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 70 350 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan8g0771 1240 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 1240 - -
Lan8g0771 1240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 984 1221 IPR027417 -
Lan8g0771 1240 Pfam ABC transporter transmembrane region 70 333 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan8g0771 1240 Pfam ABC transporter transmembrane region 680 917 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan8g0771 1240 CDD ABC_6TM_ABCC_D2 680 969 IPR044726 GO:0140359
Lan8g0771 1240 CDD ABC_6TM_ABCC_D1 71 358 IPR044746 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0771 Lan-Chr8 9853195 9858541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0771 379 639 Calmodulin-binding Proteins AT2G36910 31.095 2.53e-25 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0771 8 9853195 9858541 Lan4g1835 4 26897453 26904495 LSH
Lan7g0997 7 9957102 9964208 Lan8g0771 8 9853195 9858541 PCT
Lan8g0771 8 9853195 9858541 Lan7g0997 7 9957102 9964208 PCT