Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0766 ATGGAAGGAAATTTGTCACAGGGAGGTATAATTCAAGGTGGTAATTCTTTTGGTGGCTTTGGTTTACAAGAATCAATTCAGGTTCATCATCAAGCACAGCATTCCCGTACCATGCACCAGCATCAAACTCTTCCGCGTCAAGGGTCTTCCGTACATTCTTCAGTTCATGAAGGTTTTCCTCTTACAATGGGAACCTTACAGAATTGTGATCACACCATTCCAATGACAGACTTTAGCAAGGCAGATAGAAGTAAAAACTCAGCAAGTGAAGAAGATGAGCCGAGTTTTACTGAGGATGGTTTTGATGGTCACCATGAATCTGGCAGAGGGAAAAAAGGGTCACCTTGGCAACGTGTGAAGTGGAGTGATAAGATGGTGAAGCTTCTGATAACAGCTGTTTCTTATATAGGTGAGGATGGGACTTCCGATGGCAGCGGCAGCAGAAGAAGAAAATTTGTGATTCTACAGAAAAAAGGCAAGTGGAAATCTATTTCGAAAGTCATGGCTGAAAGGGGTTATCACGTTTCACCTCAACAGTGTGAGGATAAGTTCAATGATCTCAATAAGAGGTATAAAAAGCTTAATGATATGCTCGGGAGGGGAACTTCTTGTCAGGTTGTTGAAAATCCTGCGTTGTTGGATTTAATAGATTATCTTTCTGAGAAAGAAAAGGATGATGTTCGCAAAATATTAAGCTCAAAACACCTGTTCTACGAAGAGATGTGTTCTTATCATAATAGTAATCGATTGCATTTGCCCCATGACCCTGCATTACAACGTTCACTACAGTTAGCTCTCCGAAATAGAGATGATCATGATAATGATGATATCGGAAGGTCCCGCCATGATGATCATGATGAAGATGATCAAGATGATGAAGTAGATGGTCATGATGAGGTTGAAGAGAACTGTGCTTCTCATGGAGACAGTAGAGGAATATATGGGCCATTCGGGGGGTCTATGAAGAAGAAATTGAAACAGTGCCATGGCCATGAAGATGCTTCTACTTTTGTTAATCCTTTAAGCTGTCAGGATCACAACAAACATGCATATCCCCATGCACAGATGGTCCAATCCGATTCTAGTCAAGTTCTACCCGAAGGCACAAGAGCAGCTTGGTTACAGAAGCAATGGTTTGAATCTCACTCACTTCAGTTAGAAGAACAGAAGCTGCAAATTCAGGTTGAGATGTTGGAACTAGAGAAGCAGAGATTCAAGTGGGAGAGGTTTAGTAAGAAGAAGGATCGGGAGCTGGAGAAACTTAGAATGGAAAACGAAAGGATGAGGCTTGAAAATGAACACATTGCTTTAGAACTGAAGCGAAAGGAAATAGGTGGCTTTAACTAG 1347 0.4143 MEGNLSQGGIIQGGNSFGGFGLQESIQVHHQAQHSRTMHQHQTLPRQGSSVHSSVHEGFPLTMGTLQNCDHTIPMTDFSKADRSKNSASEEDEPSFTEDGFDGHHESGRGKKGSPWQRVKWSDKMVKLLITAVSYIGEDGTSDGSGSRRRKFVILQKKGKWKSISKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDLIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNSNRLHLPHDPALQRSLQLALRNRDDHDNDDIGRSRHDDHDEDDQDDEVDGHDEVEENCASHGDSRGIYGPFGGSMKKKLKQCHGHEDASTFVNPLSCQDHNKHAYPHAQMVQSDSSQVLPEGTRAAWLQKQWFESHSLQLEEQKLQIQVEMLELEKQRFKWERFSKKKDRELEKLRMENERMRLENEHIALELKRKEIGGFN* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0766 448 MobiDBLite consensus disorder prediction 269 316 - -
Lan8g0766 448 Coils Coil 411 440 - -
Lan8g0766 448 MobiDBLite consensus disorder prediction 269 286 - -
Lan8g0766 448 MobiDBLite consensus disorder prediction 28 56 - -
Lan8g0766 448 Gene3D - 121 193 - -
Lan8g0766 448 PANTHER FACTOR, PUTATIVE-RELATED 1 445 - -
Lan8g0766 448 MobiDBLite consensus disorder prediction 28 57 - -
Lan8g0766 448 Pfam Myb/SANT-like DNA-binding domain 118 244 IPR044822 -
Lan8g0766 448 MobiDBLite consensus disorder prediction 83 116 - -
Lan8g0766 448 MobiDBLite consensus disorder prediction 70 116 - -
Lan8g0766 448 Coils Coil 381 408 - -
Lan8g0766 448 PANTHER F16F4.11 PROTEIN-RELATED 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0766 Lan-Chr8 9829983 9832294 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan8g0766 Myb_DNA-bind_4 7.8e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0766 - - gmx:100816474 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0766 8 9829983 9832294 Lan4g1826 4 26827304 26829565 LSH
Lan7g1008 7 10158149 10161631 Lan8g0766 8 9829983 9832294 PCT
Lan8g1208 8 17839490 17842977 Lan8g0766 8 9829983 9832294 PCT
Lan8g0766 8 9829983 9832294 Lan7g1008 7 10158149 10161631 PCT
Lan8g0766 8 9829983 9832294 Lan8g1208 8 17839490 17842977 PCT