Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0765 ATGTTGGGGGACTCATCAGAAGGAGGTGGTGGCGGAGAGGTTGCGGCGGTGGTGGTAGGTGGTGGTGGTGGATCAACTTCAGGAGATGAAGAGAGAAGAATGGAAGAAAGTGACCGTAGTAGTAGCTTCGGTGGAAACCGGTGGCCAAGACAAGAGACTTTGGCTTTGTTAAGGATACGGTCGGATATGGACGTGGCGTTTCGTGATGCAAGTGTTAAAGCTCCTTTGTGGGAACAAGTATCAAGGAAGCTAGCTGAACTTGGGTATAAAAGAAGTGCCAAGAAATGCAAAGAGAAATTTGAGAACGTGTACAAGTATCATAAAAGAACCAAAGATGGTCGAAGTGGCAAATCAGAAGGCAAAACTTATCGATTTTTTGATCAACTACAAGCCCTTGAACATCACCACCCTCCAACAATTCATTCCTCTTACACACCACAATCATCACTAGCACCACCACCAATATCATCATCAATTGTAGCAACAGCAACAACAACAGTGCCAATGCCAATGCCACCAGTGGCTAACACCACTCTTGGTAGTGTTAGTGTCCCTCATGTCTCTATTCCTCAAGGCATTGTCACTTCTACCCCATCAATAAACCTAATAAATGTCCCTTCCTATCAACCTACAAACCCTACAAACTTCCCACCACCATTAACAAACCCTACTACAAGTGCTACAATTCCAATATCTTTCCCAAACATCCCAAATGATCTCTTGTCCAACTCAAGTATCTCGTCCTCATCGACTTCTTCCGATGAAATATTGGACGGGAGGCGCAAGCGGAAGCGCAAATGGGAAGACTTCTTCAATAGACTAATGAAGAATGTGATGGAGAAGCAAGTGGAACAGCAAAGGACATTCTTGGAAGCTATAGAGAAGCGCGAGCATGAGCGAATGGTAAGAGAAGAAGCATGGAGAGTGCAAGAGATACAAAGGATCAATAAAGAGAGGGAAATTCTAGCTCAAGAAAGATCCACAGCCGCTGCCAAGGATGCTGCAGTCATGGCTTTCTTGCAAAAGTTGGCTGAAAAACAAAATTTTGGACAAGCATTGAATAATAACATTAGCATTCCACCACAACCACAGCAACAACAATCTCAATTGCAGCCACAAGTGGTGGCACAACCAATTGCACCACCAGCACCAACTATTGCTCCAACACTTGTGCAACCACAAATACAACTTATTGTTCAGCCTGGCCCACCACTGCAACCTGTGGTCCCACCACCACCACCACCACAACAACAAGTCACAAATACGGAAATCGTGAGAGTTGATAATAATGGGGAGAATATGATAGGAGCAAGCTCATCAAGGTGGCCAAAAGTGGAGATAGAAGCATTGATAAAGCTGAGAACTGAGCTTGACATGAAGTACCAAGAGAACACACCAAAAGGACCACTTTGGGAAGAGATTTCATCCTCAATGAGGAAGCTCGGGTACAATAGGAATGCAAAGAGATGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAGGTGAAGGAAAGTAACAAGAAAAGATCAGAAGATTCAAAAACATGTCCTTATTATCAGCAGCTGGAAGCATTATATAAAGAGAAGAACAAGATGGTGCAGCCGGAGAGTATGGTGGCGCCGCTGATGGTGCAGCCGGAACAGCAATGGCCTCCTCAACAGCAGAGGGAAGAAGATCATGATGATTTTGATGATGAAGAGAAGAATGTAGAAGAAAAAGAGAAAGAAAGTGAAGGTTGCAAGAATGAGGTAGTGGCAAACAAGGCTGCATCAGGTGAGTATGGTGGGGTTTGGGAGCGAATGGTAAGAGAAGAAGCATGGAGAGTGCAAGAGATACAAAGGATCAATAAAGAGAGGGAAATTCTAGCTCAAGAAAGATCCACAGCCGCTGCCAAGGATGCTGCAGTCATGGCTTTCTTGCAAAAGTTGGCTGAAAAACAAAATTTTGGACAAGCATTGAATAATAACATTAGCATTCCACCACAACCACAGCAACAACAATCTCAATTGCAGCCACAAGTGGTGGCACAACCAATTGCACCACCAGCACCAACTATTGCTCCAACACTTGTGCAACCACAAATACAACTTATTGTTCAGCCTGGCCCACCACTGCAACCTGTGGTCCCACCACCACCACCACCACAACAACAAGTCACAAATACGGAAATCGTGAGAGTTGATAATAATGGGGAGAATATGATAGGAGCAAGCTCATCAAGGTGGCCAAAAGTGGAGATAGAAGCATTGATAAAGCTGAGAACTGAGCTTGACATGAAGTACCAAGAGAACACACCAAAAGGACCACTTTGGGAAGAGATTTCATCCTCAATGAGGAAGCTCGGGTACAATAGGAATGCAAAGAGATGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAGGTGAAGGAAAGTAACAAGAAAAGATCAGAAGATTCAAAAACATGTCCTTATTATCAGCAGCTGGAAGCATTATATAAAGAGAAGAACAAGATGGTGCAGCCGGAGAGTATGGTGGCGCCGCTGATGGTGCAGCCGGAACAGCAATGGCCTCCTCAACAGCAGAGGGAAGAAGATCATGATGATTTTGATGATGAAGAGAAGAATGTAGAAGAAAAAGAGAAAGAAAGTGAAGGTTGCAAGAATGAGGTAGTGGCAAACAAGGCTGCATCAGGTGAGTAG 2694 0.4414 MLGDSSEGGGGGEVAAVVVGGGGGSTSGDEERRMEESDRSSSFGGNRWPRQETLALLRIRSDMDVAFRDASVKAPLWEQVSRKLAELGYKRSAKKCKEKFENVYKYHKRTKDGRSGKSEGKTYRFFDQLQALEHHHPPTIHSSYTPQSSLAPPPISSSIVATATTTVPMPMPPVANTTLGSVSVPHVSIPQGIVTSTPSINLINVPSYQPTNPTNFPPPLTNPTTSATIPISFPNIPNDLLSNSSISSSSTSSDEILDGRRKRKRKWEDFFNRLMKNVMEKQVEQQRTFLEAIEKREHERMVREEAWRVQEIQRINKEREILAQERSTAAAKDAAVMAFLQKLAEKQNFGQALNNNISIPPQPQQQQSQLQPQVVAQPIAPPAPTIAPTLVQPQIQLIVQPGPPLQPVVPPPPPPQQQVTNTEIVRVDNNGENMIGASSSRWPKVEIEALIKLRTELDMKYQENTPKGPLWEEISSSMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKRSEDSKTCPYYQQLEALYKEKNKMVQPESMVAPLMVQPEQQWPPQQQREEDHDDFDDEEKNVEEKEKESEGCKNEVVANKAASGEYGGVWERMVREEAWRVQEIQRINKEREILAQERSTAAAKDAAVMAFLQKLAEKQNFGQALNNNISIPPQPQQQQSQLQPQVVAQPIAPPAPTIAPTLVQPQIQLIVQPGPPLQPVVPPPPPPQQQVTNTEIVRVDNNGENMIGASSSRWPKVEIEALIKLRTELDMKYQENTPKGPLWEEISSSMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKRSEDSKTCPYYQQLEALYKEKNKMVQPESMVAPLMVQPEQQWPPQQQREEDHDDFDDEEKNVEEKEKESEGCKNEVVANKAASGE* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0765 897 Pfam Myb/SANT-like DNA-binding domain 46 132 IPR044822 -
Lan8g0765 897 Pfam Myb/SANT-like DNA-binding domain 742 829 IPR044822 -
Lan8g0765 897 Pfam Myb/SANT-like DNA-binding domain 440 527 IPR044822 -
Lan8g0765 897 ProSiteProfiles Myb-like domain profile. 742 800 IPR001005 -
Lan8g0765 897 PANTHER - 20 580 - -
Lan8g0765 897 PANTHER - 601 881 - -
Lan8g0765 897 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 20 580 - -
Lan8g0765 897 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 601 881 - -
Lan8g0765 897 MobiDBLite consensus disorder prediction 1 47 - -
Lan8g0765 897 ProSiteProfiles Myb-like domain profile. 440 498 IPR001005 -
Lan8g0765 897 MobiDBLite consensus disorder prediction 841 897 - -
Lan8g0765 897 CDD GT1 742 807 - -
Lan8g0765 897 Gene3D - 48 109 - -
Lan8g0765 897 Gene3D - 744 805 - -
Lan8g0765 897 Gene3D - 442 503 - -
Lan8g0765 897 MobiDBLite consensus disorder prediction 550 584 - -
Lan8g0765 897 CDD GT1 440 505 - -
Lan8g0765 897 CDD GT1 46 111 - -
Lan8g0765 897 MobiDBLite consensus disorder prediction 242 262 - -
Lan8g0765 897 ProSiteProfiles Myb-like domain profile. 40 104 IPR001005 -
Lan8g0765 897 Coils Coil 860 887 - -
Lan8g0765 897 SMART sant 44 106 IPR001005 -
Lan8g0765 897 SMART sant 740 802 IPR001005 -
Lan8g0765 897 SMART sant 438 500 IPR001005 -
Lan8g0765 897 Coils Coil 558 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0765 Lan-Chr8 9813500 9818901 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0765 601 878 Trihelix Transcription Factor Family AT1G76890 46.953 1.38e-61 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan8g0765 Myb_DNA-bind_4 5.5e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0765 - - lang:109353888 1378.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0765 8 9813500 9818901 Lan4g1825 4 26811787 26814976 LSH