Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0764 ATGCAGCTGGGTGACCCAACTGTGTTGGAGACTTCCTCCGGCGAGGCCGTGGCGGAGAATGACGGAGGCAGCGAGCAGAAGGGAATAATAAGAAATGATAGTGGTGGTGATGGTCATGGAGATGAGAGTCATGAGAAGATGAACGGTGGAGGAAACCGGTGGCCCCGCCAACAAACATTGGCTTTATTGAAGATAAGGTCGGATATGGATGCTGTGTTTCGTGATTCAAGTCTTAAGGGTCCACTTTGGGAAGATGTTTCAAGGAAACTAGCAGATCTTGGTTATCACAGAAGCGCAAAGAAATGCAAGGAGAAATTTGAGAACGTGTACAAGTACAACAAGAGAACAAAAGAGAGCAGAAATGCGAAATCTGAAGGAAAAACATACAGATTCTTTGATCAATTACAAGCTCTTGAGAAACAATTCAATGTCTCTTCTTACCCACCAAAACCACAACCACAACCACAACTTACGTTGTCAAAAACAAACAACAACGTTTCCACTGATACTATTGCATCTATTCCTTTTATTTCCACCACCACTGTTCCATCCACAAACCCTAGCAATGATAATAATAATAACAAGAACAATGTTTCATATTCTTTGCCCAATATCACAAACCTTTTCTCTAACACATCTTCAACATCTTCTACGGCTTCGGATGAAGACTTGGGAGAGAAGTACAGGAAGAAGAGGAAATGGAAGGACTACTTTCGGAAGCTGACGAGGAAGGTCTTGGCCAAGCAAGAGGAAATGCAGAAGAAGTTCTTGGAAGTGATAGACACAAGGGAGAAGGAACATGTGACACAACAAGACGCTTGGAGGATTCAGAAAATGGCAAGGATCAATAGAGAACATGAACTTCTTGCTCAAGAAAGAAAAACTGCAGCAGCAAAAGATGCTGCAATTGTTGCATTCTTGCAAAAGTTATCTGGTGAGAAGAACCATACAACTTCTGCAAAAATAACACCAACACCATCACTGTCATTATCACCTCTACCGTCACATCCACCAGTATTACAAGAATTACGGCCACAGCCACAACAAAAACATATGCATCAACTGCCATTGATGGTGATTAACGACAACGTTGAAATTCAGAAAATGAATAACGGTCATAGTAATGGTGGTCCATTAAACTCTTCTTCAAGGTGGCCAAAGGCAGAAGTTCAAGCTTTGATAAGGCTGAGGACTAGTCTCGATGCTAAGTATCAAGAAAATGCACCAAAAGCTCCATTATGGGAGGATATCTCAGCTGGGATGCAAAGGCTTGGGTACACTAGGAGTGCTAAGAGATGCAAAGAGAAATGGGAAAACATCAACAAGTACTTCAAAAAGGTGAAGGAAAGTAGCAAGAAAAGACGGGAGGATAGTAAAACATGCCCCTATTTTGAAGAGCTTGAAGCTCTATACCAAGAAAAGAGCAAAACTCAGAACCCCTTTGGTGGTGTTGCTTTTGCATTCAACAATATGAAGCCAAATGAGATGATGGAGCCGTTGATGGTGCAACCAGAACAACAATGGAGGCCACCCTCTGAAACTGAGTTGAATGAGAATAATGGAGATAAAGAAAGAGAGATGGAAGATGCAGAAGAAGGAGATAGCATGGAAGATGATAAGGATGATGGTGAAGAAGATGTAGATAGCATGGAAGAAGACAAAGAAGGAGATAACGGTTATGAGATTGCTACAAATAAAATTTCTTCAGTGGACACAGTTGAATGA 1725 0.4157 MQLGDPTVLETSSGEAVAENDGGSEQKGIIRNDSGGDGHGDESHEKMNGGGNRWPRQQTLALLKIRSDMDAVFRDSSLKGPLWEDVSRKLADLGYHRSAKKCKEKFENVYKYNKRTKESRNAKSEGKTYRFFDQLQALEKQFNVSSYPPKPQPQPQLTLSKTNNNVSTDTIASIPFISTTTVPSTNPSNDNNNNKNNVSYSLPNITNLFSNTSSTSSTASDEDLGEKYRKKRKWKDYFRKLTRKVLAKQEEMQKKFLEVIDTREKEHVTQQDAWRIQKMARINREHELLAQERKTAAAKDAAIVAFLQKLSGEKNHTTSAKITPTPSLSLSPLPSHPPVLQELRPQPQQKHMHQLPLMVINDNVEIQKMNNGHSNGGPLNSSSRWPKAEVQALIRLRTSLDAKYQENAPKAPLWEDISAGMQRLGYTRSAKRCKEKWENINKYFKKVKESSKKRREDSKTCPYFEELEALYQEKSKTQNPFGGVAFAFNNMKPNEMMEPLMVQPEQQWRPPSETELNENNGDKEREMEDAEEGDSMEDDKDDGEEDVDSMEEDKEGDNGYEIATNKISSVDTVE* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0764 574 PANTHER - 20 564 - -
Lan8g0764 574 CDD GT1 52 117 - -
Lan8g0764 574 Gene3D - 385 446 - -
Lan8g0764 574 Gene3D - 54 115 - -
Lan8g0764 574 Coils Coil 279 299 - -
Lan8g0764 574 ProSiteProfiles Myb-like domain profile. 52 110 IPR001005 -
Lan8g0764 574 Coils Coil 513 533 - -
Lan8g0764 574 MobiDBLite consensus disorder prediction 1 55 - -
Lan8g0764 574 ProSiteProfiles Myb-like domain profile. 377 441 IPR001005 -
Lan8g0764 574 MobiDBLite consensus disorder prediction 1 19 - -
Lan8g0764 574 Pfam Myb/SANT-like DNA-binding domain 52 138 IPR044822 -
Lan8g0764 574 Pfam Myb/SANT-like DNA-binding domain 383 470 IPR044822 -
Lan8g0764 574 MobiDBLite consensus disorder prediction 504 574 - -
Lan8g0764 574 SMART sant 381 443 IPR001005 -
Lan8g0764 574 SMART sant 50 112 IPR001005 -
Lan8g0764 574 CDD GT1 383 448 - -
Lan8g0764 574 MobiDBLite consensus disorder prediction 178 199 - -
Lan8g0764 574 MobiDBLite consensus disorder prediction 32 49 - -
Lan8g0764 574 MobiDBLite consensus disorder prediction 527 555 - -
Lan8g0764 574 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 20 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0764 Lan-Chr8 9805310 9807922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0764 36 515 Trihelix Transcription Factor Family AT1G76890 46.314 2.11e-137 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan8g0764 Myb_DNA-bind_4 9.1e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0764 - - gmx:100776819 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0764 8 9805310 9807922 Lan4g1824 4 26797561 26800383 LSH
Lan7g1009 7 10274467 10278041 Lan8g0764 8 9805310 9807922 PCT
Lan8g1206 8 17779334 17783028 Lan8g0764 8 9805310 9807922 PCT
Lan8g0764 8 9805310 9807922 Lan7g1009 7 10274467 10278041 PCT
Lan8g0764 8 9805310 9807922 Lan8g1206 8 17779334 17783028 PCT