Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan8g0755 | ATGTGCTTTATAACGGTGGCGCATCAAAGGGGTTCAGGGAAGTTGACGGAGGAGCACGGCAGCGATGAGGAGGAGGAGGAAGGAGATTTAAGTGCCATTGTTTCGGGGATGACACGTGTGGTATCAACTCCTTCTGCATCTGCTGAAAGTAGTAGCATAGTCATAGGAAGTGGTTCTCCTATGATGTCATTCTATTCTTCTTCTCCTAGTTTGTCTTGTTCTGTTGGACACAAAAGAGGGCGTGAACATGAAAATATCATACCCCAAGGAGAATCATCTTCAAGTGAAGAGAGAAGAAGATACAGAGGAGTAAGGCAGAGACCATGGGGAAAATGGGCAGCAGAAATTCGTGATCCACACAAAGCAGCAAGAGTATGGCTTGGAACTTTCGAAACTGCAGAGGCTGCAGCAAGAGCTTATGATGAAGCTGCTTTAAGATTCAGAGGAAACAGAGCAAAACTCAACTTCCCTGAAAACGTTAGAGCAATGCCGCCACCACCACCACCACCACCACCACCACCAACCCATTTATCCTCTTCATCGTTCATGCAGATGGCGGCGCCACCACCACTTCACGGCTCCAATGACTTGATGAGAGACTATTGGCAATATTCACAATTGTTGAAGGCTTCTGGAGATTACCATGGACTTGACCAATGGTTCTATGATTCTCACATGGCTACACTTCAATCTTCATCTTCTTCTCCTTCTTCTCAAATGTCCTTCTCTGCTTCATTTCCTACCATGTTTTCAAGTCAGCAAATGGGGTTGTTCCGGCCACCGGAGGACCACTCTCACGGTGGCAGTGACGGAAGTGGTGGAGGCTCAGATTATATACCTTCAACAACAACGACAACGTGGTCAAATATTAGTGGTCATCCTCCTCCACGTGGTTGA | 897 | 0.4682 | MCFITVAHQRGSGKLTEEHGSDEEEEEGDLSAIVSGMTRVVSTPSASAESSSIVIGSGSPMMSFYSSSPSLSCSVGHKRGREHENIIPQGESSSSEERRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFETAEAAARAYDEAALRFRGNRAKLNFPENVRAMPPPPPPPPPPPTHLSSSSFMQMAAPPPLHGSNDLMRDYWQYSQLLKASGDYHGLDQWFYDSHMATLQSSSSSPSSQMSFSASFPTMFSSQQMGLFRPPEDHSHGGSDGSGGGSDYIPSTTTTTWSNISGHPPPRG* | 299 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan8g0755 | 298 | MobiDBLite | consensus disorder prediction | 275 | 292 | - | - | |
Lan8g0755 | 298 | MobiDBLite | consensus disorder prediction | 9 | 28 | - | - | |
Lan8g0755 | 298 | ProSiteProfiles | AP2/ERF domain profile. | 100 | 157 | IPR001471 | GO:0003700|GO:0006355 | |
Lan8g0755 | 298 | MobiDBLite | consensus disorder prediction | 160 | 177 | - | - | |
Lan8g0755 | 298 | PANTHER | DNA-BINDING DOMAIN | 16 | 255 | IPR044808 | GO:0003700|GO:0009873 | |
Lan8g0755 | 298 | Gene3D | AP2/ERF domain | 99 | 159 | IPR036955 | GO:0003700|GO:0006355 | |
Lan8g0755 | 298 | PRINTS | Ethylene responsive element binding protein signature | 101 | 112 | IPR001471 | GO:0003700|GO:0006355 | |
Lan8g0755 | 298 | PRINTS | Ethylene responsive element binding protein signature | 123 | 139 | IPR001471 | GO:0003700|GO:0006355 | |
Lan8g0755 | 298 | Pfam | AP2 domain | 100 | 149 | IPR001471 | GO:0003700|GO:0006355 | |
Lan8g0755 | 298 | MobiDBLite | consensus disorder prediction | 157 | 190 | - | - | |
Lan8g0755 | 298 | MobiDBLite | consensus disorder prediction | 81 | 102 | - | - | |
Lan8g0755 | 298 | SMART | rav1_2 | 100 | 163 | IPR001471 | GO:0003700|GO:0006355 | |
Lan8g0755 | 298 | MobiDBLite | consensus disorder prediction | 254 | 298 | - | - | |
Lan8g0755 | 298 | CDD | AP2 | 108 | 159 | IPR001471 | GO:0003700|GO:0006355 | |
Lan8g0755 | 298 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 | 16 | 255 | - | - | |
Lan8g0755 | 298 | SUPERFAMILY | DNA-binding domain | 100 | 158 | IPR016177 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan8g0755 | Lan-Chr8 | 9743133 | 9744947 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan8g0755 | 29 | 161 | AP2-EREBP Transcription Factor Family | AT5G61890 | 47.368 | 4.21e-35 | 125 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Lan8g0755 | AP2 | 3.1e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan8g0755 | - | - | lang:109354598 | 469.159 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan7g1023 | 7 | 10715172 | 10717364 | Lan8g0755 | 8 | 9743133 | 9744947 | PCT | |
Lan8g1065 | 8 | 13377645 | 13380767 | Lan8g0755 | 8 | 9743133 | 9744947 | PCT | |
Lan8g0755 | 8 | 9743133 | 9744947 | Lan7g1023 | 7 | 10715172 | 10717364 | PCT | |
Lan8g0755 | 8 | 9743133 | 9744947 | Lan8g1065 | 8 | 13377645 | 13380767 | PCT |