Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0755 ATGTGCTTTATAACGGTGGCGCATCAAAGGGGTTCAGGGAAGTTGACGGAGGAGCACGGCAGCGATGAGGAGGAGGAGGAAGGAGATTTAAGTGCCATTGTTTCGGGGATGACACGTGTGGTATCAACTCCTTCTGCATCTGCTGAAAGTAGTAGCATAGTCATAGGAAGTGGTTCTCCTATGATGTCATTCTATTCTTCTTCTCCTAGTTTGTCTTGTTCTGTTGGACACAAAAGAGGGCGTGAACATGAAAATATCATACCCCAAGGAGAATCATCTTCAAGTGAAGAGAGAAGAAGATACAGAGGAGTAAGGCAGAGACCATGGGGAAAATGGGCAGCAGAAATTCGTGATCCACACAAAGCAGCAAGAGTATGGCTTGGAACTTTCGAAACTGCAGAGGCTGCAGCAAGAGCTTATGATGAAGCTGCTTTAAGATTCAGAGGAAACAGAGCAAAACTCAACTTCCCTGAAAACGTTAGAGCAATGCCGCCACCACCACCACCACCACCACCACCACCAACCCATTTATCCTCTTCATCGTTCATGCAGATGGCGGCGCCACCACCACTTCACGGCTCCAATGACTTGATGAGAGACTATTGGCAATATTCACAATTGTTGAAGGCTTCTGGAGATTACCATGGACTTGACCAATGGTTCTATGATTCTCACATGGCTACACTTCAATCTTCATCTTCTTCTCCTTCTTCTCAAATGTCCTTCTCTGCTTCATTTCCTACCATGTTTTCAAGTCAGCAAATGGGGTTGTTCCGGCCACCGGAGGACCACTCTCACGGTGGCAGTGACGGAAGTGGTGGAGGCTCAGATTATATACCTTCAACAACAACGACAACGTGGTCAAATATTAGTGGTCATCCTCCTCCACGTGGTTGA 897 0.4682 MCFITVAHQRGSGKLTEEHGSDEEEEEGDLSAIVSGMTRVVSTPSASAESSSIVIGSGSPMMSFYSSSPSLSCSVGHKRGREHENIIPQGESSSSEERRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFETAEAAARAYDEAALRFRGNRAKLNFPENVRAMPPPPPPPPPPPTHLSSSSFMQMAAPPPLHGSNDLMRDYWQYSQLLKASGDYHGLDQWFYDSHMATLQSSSSSPSSQMSFSASFPTMFSSQQMGLFRPPEDHSHGGSDGSGGGSDYIPSTTTTTWSNISGHPPPRG* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0755 298 MobiDBLite consensus disorder prediction 275 292 - -
Lan8g0755 298 MobiDBLite consensus disorder prediction 9 28 - -
Lan8g0755 298 ProSiteProfiles AP2/ERF domain profile. 100 157 IPR001471 GO:0003700|GO:0006355
Lan8g0755 298 MobiDBLite consensus disorder prediction 160 177 - -
Lan8g0755 298 PANTHER DNA-BINDING DOMAIN 16 255 IPR044808 GO:0003700|GO:0009873
Lan8g0755 298 Gene3D AP2/ERF domain 99 159 IPR036955 GO:0003700|GO:0006355
Lan8g0755 298 PRINTS Ethylene responsive element binding protein signature 101 112 IPR001471 GO:0003700|GO:0006355
Lan8g0755 298 PRINTS Ethylene responsive element binding protein signature 123 139 IPR001471 GO:0003700|GO:0006355
Lan8g0755 298 Pfam AP2 domain 100 149 IPR001471 GO:0003700|GO:0006355
Lan8g0755 298 MobiDBLite consensus disorder prediction 157 190 - -
Lan8g0755 298 MobiDBLite consensus disorder prediction 81 102 - -
Lan8g0755 298 SMART rav1_2 100 163 IPR001471 GO:0003700|GO:0006355
Lan8g0755 298 MobiDBLite consensus disorder prediction 254 298 - -
Lan8g0755 298 CDD AP2 108 159 IPR001471 GO:0003700|GO:0006355
Lan8g0755 298 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 16 255 - -
Lan8g0755 298 SUPERFAMILY DNA-binding domain 100 158 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0755 Lan-Chr8 9743133 9744947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0755 29 161 AP2-EREBP Transcription Factor Family AT5G61890 47.368 4.21e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan8g0755 AP2 3.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0755 - - lang:109354598 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1023 7 10715172 10717364 Lan8g0755 8 9743133 9744947 PCT
Lan8g1065 8 13377645 13380767 Lan8g0755 8 9743133 9744947 PCT
Lan8g0755 8 9743133 9744947 Lan7g1023 7 10715172 10717364 PCT
Lan8g0755 8 9743133 9744947 Lan8g1065 8 13377645 13380767 PCT