Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan8g0753 | ATGGCAGAATCTCTGCAAGTTGACTCACACAATTCATTCTCACTCGCTGGGTTCAAGTGTTTTCCAATTGATGCCAATACATGCTTCACTGATTTCTCTCTCACCATTCCAATTCCTGTTGTATCTATAGCTCAAAAGATAGGAGCAGAGTTTGTGGGGACATTCATATTGATATTTGCAGCAGTAGCTGGACCAATAGTGAACAATAAATACAATGGAGCAGAGAGTTTGATGGGAAATGCAGCATGTTCAGGACTAACAGTGATGTTTGTGATAATCTCAATTGGTCACATATCTGGTGCACATCTTAACCCATCAGTAACCATTGCTTTTGCAGCATTTCGGCATTTCCCTTGGACCCTTGTTCCAGCATACATAGCTGCACAAGTTTCTGCATCCATTTGTGCAAGTTTTGCACTAAAAGCTGTTTATCATCCTTACCTAACTGGAGGAGTCACAGTTCCTTCTGTCACAGTTGGTCAAGCTTTTGCAACTGAGTTTATAATCACTTTTATTCTCATGTTTGTGATCACTGCTGTTGCTACTGATACTCGTGCGGTTGGTGAATTAGCAGGTATTGCTATTGGCGCTACAGTTTTGCTCAACATTCTCATAGCAGGGCCAACAAGTGGTGGTTCGATGAATCCGGTGCGGACCTTGGGTCCAGCCGTTGCAGCAGGAAATTACAAACATATATGGATCTATTTTGTGGCACCACCACTTGGTGCTCTCGCTGGTGCAGGTGTTTACACTCTCATCAAGCTCCGTCACACCGGAGATGAACCACTACGACGGTGTAGGACCTTTCGTTGCTAG | 816 | 0.4387 | MAESLQVDSHNSFSLAGFKCFPIDANTCFTDFSLTIPIPVVSIAQKIGAEFVGTFILIFAAVAGPIVNNKYNGAESLMGNAACSGLTVMFVIISIGHISGAHLNPSVTIAFAAFRHFPWTLVPAYIAAQVSASICASFALKAVYHPYLTGGVTVPSVTVGQAFATEFIITFILMFVITAVATDTRAVGELAGIAIGATVLLNILIAGPTSGGSMNPVRTLGPAVAAGNYKHIWIYFVAPPLGALAGAGVYTLIKLRHTGDEPLRRCRTFRC* | 272 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan8g0753 | 271 | ProSitePatterns | MIP family signature. | 102 | 110 | IPR022357 | - | |
| Lan8g0753 | 271 | Pfam | Major intrinsic protein | 42 | 250 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
| Lan8g0753 | 271 | PANTHER | AQUAPORIN NIP5-1-RELATED | 4 | 268 | - | - | |
| Lan8g0753 | 271 | SUPERFAMILY | Aquaporin-like | 42 | 260 | IPR023271 | - | |
| Lan8g0753 | 271 | PANTHER | AQUAPORIN NIP2-1 | 4 | 268 | IPR034294 | - | |
| Lan8g0753 | 271 | Gene3D | Glycerol uptake facilitator protein. | 37 | 261 | IPR023271 | - | |
| Lan8g0753 | 271 | PRINTS | Major intrinsic protein family signature | 45 | 64 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
| Lan8g0753 | 271 | PRINTS | Major intrinsic protein family signature | 84 | 108 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
| Lan8g0753 | 271 | PRINTS | Major intrinsic protein family signature | 121 | 140 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
| Lan8g0753 | 271 | PRINTS | Major intrinsic protein family signature | 165 | 183 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
| Lan8g0753 | 271 | PRINTS | Major intrinsic protein family signature | 196 | 218 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
| Lan8g0753 | 271 | PRINTS | Major intrinsic protein family signature | 233 | 253 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan8g0753 | Lan-Chr8 | 9722840 | 9725134 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan8g0753 | 19 | 270 | Major Intrinsic Protein MIP | AT4G10380 | 70.930 | 1.41e-132 | 375 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan8g0753 | K09874 | - | gmx:100775229 | 426.787 |
Event-related genes