Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan8g0752 | ATGAAGAATATTGCTCCTCATATTAATAGTGTTACCACTGTGTTATTTTCCTTAGTGTTGTTCTACCTCACCATGACTAAGGTAGAAGTAATAACTTGTCTTTCACTTGATGGAAAGACTCTTCTTTCACTTAAATCATCACCTTTTGTTCTCTCATCATGGAACCCTTCAAGCTCAACACCATGTTCATGGAATGGCATTACTTGTTCTCCACAAGGTAGAGTCATTTCCCTCTCCATTTCAGACACTTTCCTCAACCTTTCTTCTTTGCCTCCTCAGCTTTCATCTCTATCAATGCTTCAACTTCTCAATCTCTCTTCCACCAATGTCTCTGGCTCCATTCCACCCTCTTTTGGCCAACTCTCACATCTTCAAATCCTTGACCTCTCCTCAAACTCTCTCACTGGTTCCATTCCTCATGAACTTGGTAGACTCTCTTCCCTTCAGTTCCTTTTCTTGAACTCAAACAGATTAACAGGAACTCTTCCTCAACAACTTGCTGATCTAACTTCACTTCAGGTTCTTTGCCTTCAAGACAATCTTCTCAACAGTTCAATCCCTTCAAAGTTAGGATCTTTGACATCTCTTCAGCAGTTTAGGATAGGTGGTAATCCATATCTTACAGGACAAATTCCTTCACAGTTAGGCCTACTCTCCAACCTCACCACATTTGGTGCAGCTTCTACTGGACTTTCAGGTTCTATTCCATCTACATTTGGTAACTTGGTCAATCTCCAAACATTAGCACTTTATGATACTGAAATTTCTGGTTCTATACCACCAGAACTTGGGTTTTGTTCTGAGTTGAGAAATCTTTATTTGCACATGAATAAGCTCAGTGGCTATATTCCTCCTCAGTTGAGTAAGCTGCAAAAACTTACTAGCATGCTTCTTTGGGGCAATGCATTATCTGGACCAATCCCAGCTGAGATTTCCAATTGCTCATCACTTGTTATATTTGATGTCTCTTCTAATGAGCTCTCTGGTGAAATACCTAGGGACTTTGGGAAGCTAGTGGTTCTGGAACAGCTTCATCTATCAGACAATTCACTCACAGGTCAAATACCATGGCAGTTGAGTAACTGCACAAGCCTTGCAAGTGTTCAGCTTGACAAGAATCAGTTATCAGGTACAATTCCATTGCAGGTTGGCAAGTTGAAGTTACTGCAGAGTTTTTTCATGTGGGGTAATTCAGTTTCTGGAACCATACCATCCTCTTTTGGTAACTGCACTGAACTCTACGCACTTGACCTTTCGAGGAACAAGCTCACGGGTTCTATTCCTGAAGAGATTTTCAATTTGAAGAAGCTGAGTAAGGTTCTACTTCTTGGAAACTCTTTAACCGGAAGGTTGTCATCAAGTGTTGCAAATTGTGAGTCTTTAGTGAGGTTGAGGGTTGGAGAAAACCAGCTTTCAGGACAGATTCCTAAAGATATAGGCCGACTTCAGAATCTGGTGTTTCTTGACTTGTACATGAATAAATTCTCTGGTAGCTTACCAGTGGAGATTGCTAATATCACAGTTCTTGAGCTTTTGGATGTGCACAAGAACTACTTAACTGGAGAGATTCCATCTCAGATAGGTGAACTTAAAAATTTGGAGCAACTTGATCTCAGTAGAAACATTTTGACAGGTGAAATTCCTTGGAGCTTTGGAAACTTAAGTTATTTGGACAAGCTCATCCTCAACAATAATTTACTGACAGGGTCAATTCCAAAATCCATTAGTAACTTGCAAAAGTTAACTCTATTGGATTTGAGTTACAACAACCTCTCTGGTGGTATACCACCTGAGATTGGTTATGTTACAAGCTTAACCATCAGTTTGGACTTAAGCTCAAATTCATTTACCGGAGAAATCCCAGACTCGATGTCTGCTTTGACACAGTTACAATCACTTGATCTTTCTAATAATATGCTTCATGGAACAATCAAGGTTCTTGGTTCTCTCACCAGTCTCACTTCCCTCAACATCTCCTACAACAACTTCTCAGGTCCTATCCCAGTAACTCCATTCTTCAGAACTCTATCTTCTGATTCATACATTCAGAACTACCATCTATGTCAGTCTATTGATGGAACTACATGTTCTTTAAGTTTCATTCGAAGAAACGGTTTACAAATTGGTAAAACCATAGCTTTGATCTTGGTAATTATAGCTTCAGTTACTATAATTGTCATTGTGTCATGGATTATAGTAACTAGGAATCACAGGTGTAAGGTTGAAAAAACTTTGGGGACATATGGTTCCACATCAGGAGGTGAAGATTTCTCTTATCCTTGGACCTTCATTCCATTTCAAAAGCTAAACTTCAGCATAGGAAACATCTTGGATTGTTTGAAGGATGAGAATGTGATTGGAAAAGGTTGCTCTGGCATTGTGTATAAGGCTGAGATGCCTAATGGAGAGTTGATAGCAGTGAAGAAGCTTTGGAAAGCTAACAAAGAAGATGAAACTGTAGATTCTTTTGCTGCGGAAATTCAGATTCTCGGTTACATCCGGCATAGGAACATTGTGAAGCTTCTAGGCTATTGTTCTAATAGAAGTGTTAAGCTTCTTCTTTATAATTTCATCCCAAATGGTAATCTAAGACAGCTTTTGCAAGGGAACAGGAACTTGGACTGGGAAATTAGATACAAGATTGCTGTTGGAATAGCTCAAGGACTAGCTTACCTTCATCATGATTGTGTCCCTACAATTCTCCACAGAGATGTTAAGTGCAATAACATACTCCTAGATTCCAAATTTGAAGCATATTTGGCAGATTTTGGTCTAGCAAAGCAAATGATTTCACCAACTTATCATCATGCAATGTCCAAAGTTGCTGGTTCCTATGGTTATATTGCCCCAGAGTATGGCTACTCCATGAACATAACTGAGAAGAGTGATGTGTACAGTTATGGAGTGGTGTTGCTAGAGATACTAAGCGGCCGTAGCGCTGTTGAATCGCATGTTGTAGATGGGCAACACATAGTTGAGTGGGTGAAGAGGAAGATGGGAAGCTTTGAACCAGCAGTATCAATACTAGATACAAAGCTACAATGTCTACCAGATCAAATGGTGCAAGAGATGCTCCAAACACTTGGAATTGCTATTTTCTGTGTGAACTCTTCACCGGCCGAGCGCCCCACCATGAAGGAAGTGATTGCACTACTAATGGAGGTGAAGAGTCAACCTGAAGAATTGAATAAAACCTCTCAACCTCTAATAAAACAGACCTCAACTCAATGTTGA | 3234 | 0.3989 | MKNIAPHINSVTTVLFSLVLFYLTMTKVEVITCLSLDGKTLLSLKSSPFVLSSWNPSSSTPCSWNGITCSPQGRVISLSISDTFLNLSSLPPQLSSLSMLQLLNLSSTNVSGSIPPSFGQLSHLQILDLSSNSLTGSIPHELGRLSSLQFLFLNSNRLTGTLPQQLADLTSLQVLCLQDNLLNSSIPSKLGSLTSLQQFRIGGNPYLTGQIPSQLGLLSNLTTFGAASTGLSGSIPSTFGNLVNLQTLALYDTEISGSIPPELGFCSELRNLYLHMNKLSGYIPPQLSKLQKLTSMLLWGNALSGPIPAEISNCSSLVIFDVSSNELSGEIPRDFGKLVVLEQLHLSDNSLTGQIPWQLSNCTSLASVQLDKNQLSGTIPLQVGKLKLLQSFFMWGNSVSGTIPSSFGNCTELYALDLSRNKLTGSIPEEIFNLKKLSKVLLLGNSLTGRLSSSVANCESLVRLRVGENQLSGQIPKDIGRLQNLVFLDLYMNKFSGSLPVEIANITVLELLDVHKNYLTGEIPSQIGELKNLEQLDLSRNILTGEIPWSFGNLSYLDKLILNNNLLTGSIPKSISNLQKLTLLDLSYNNLSGGIPPEIGYVTSLTISLDLSSNSFTGEIPDSMSALTQLQSLDLSNNMLHGTIKVLGSLTSLTSLNISYNNFSGPIPVTPFFRTLSSDSYIQNYHLCQSIDGTTCSLSFIRRNGLQIGKTIALILVIIASVTIIVIVSWIIVTRNHRCKVEKTLGTYGSTSGGEDFSYPWTFIPFQKLNFSIGNILDCLKDENVIGKGCSGIVYKAEMPNGELIAVKKLWKANKEDETVDSFAAEIQILGYIRHRNIVKLLGYCSNRSVKLLLYNFIPNGNLRQLLQGNRNLDWEIRYKIAVGIAQGLAYLHHDCVPTILHRDVKCNNILLDSKFEAYLADFGLAKQMISPTYHHAMSKVAGSYGYIAPEYGYSMNITEKSDVYSYGVVLLEILSGRSAVESHVVDGQHIVEWVKRKMGSFEPAVSILDTKLQCLPDQMVQEMLQTLGIAIFCVNSSPAERPTMKEVIALLMEVKSQPEELNKTSQPLIKQTSTQC* | 1078 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan8g0752 | 1077 | Pfam | Leucine rich repeat N-terminal domain | 37 | 70 | IPR013210 | - | |
Lan8g0752 | 1077 | Gene3D | Ribonuclease Inhibitor | 384 | 699 | IPR032675 | - | |
Lan8g0752 | 1077 | SUPERFAMILY | RNI-like | 90 | 448 | - | - | |
Lan8g0752 | 1077 | Pfam | Leucine Rich repeats (2 copies) | 628 | 665 | IPR025875 | - | |
Lan8g0752 | 1077 | PRINTS | Leucine-rich repeat signature | 124 | 137 | - | - | |
Lan8g0752 | 1077 | PRINTS | Leucine-rich repeat signature | 627 | 640 | - | - | |
Lan8g0752 | 1077 | Pfam | Leucine rich repeat | 532 | 591 | IPR001611 | GO:0005515 | |
Lan8g0752 | 1077 | Pfam | Leucine rich repeat | 100 | 158 | IPR001611 | GO:0005515 | |
Lan8g0752 | 1077 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 900 | 912 | IPR008271 | GO:0004672|GO:0006468 | |
Lan8g0752 | 1077 | Gene3D | Transferase(Phosphotransferase) domain 1 | 858 | 1075 | - | - | |
Lan8g0752 | 1077 | ProSitePatterns | Protein kinases ATP-binding region signature. | 786 | 809 | IPR017441 | GO:0005524 | |
Lan8g0752 | 1077 | Pfam | Protein kinase domain | 782 | 1049 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan8g0752 | 1077 | ProSiteProfiles | Leucine-rich repeat profile. | 629 | 651 | IPR001611 | GO:0005515 | |
Lan8g0752 | 1077 | SMART | LRR_typ_2 | 410 | 434 | IPR003591 | - | |
Lan8g0752 | 1077 | SMART | LRR_typ_2 | 627 | 650 | IPR003591 | - | |
Lan8g0752 | 1077 | SMART | LRR_typ_2 | 338 | 362 | IPR003591 | - | |
Lan8g0752 | 1077 | SMART | LRR_typ_2 | 242 | 266 | IPR003591 | - | |
Lan8g0752 | 1077 | SMART | LRR_typ_2 | 290 | 314 | IPR003591 | - | |
Lan8g0752 | 1077 | SMART | LRR_typ_2 | 121 | 145 | IPR003591 | - | |
Lan8g0752 | 1077 | SMART | LRR_typ_2 | 169 | 193 | IPR003591 | - | |
Lan8g0752 | 1077 | SMART | LRR_typ_2 | 530 | 553 | IPR003591 | - | |
Lan8g0752 | 1077 | SMART | LRR_typ_2 | 578 | 602 | IPR003591 | - | |
Lan8g0752 | 1077 | Gene3D | Ribonuclease Inhibitor | 186 | 281 | IPR032675 | - | |
Lan8g0752 | 1077 | Gene3D | Ribonuclease Inhibitor | 282 | 383 | IPR032675 | - | |
Lan8g0752 | 1077 | SUPERFAMILY | Protein kinase-like (PK-like) | 761 | 1052 | IPR011009 | - | |
Lan8g0752 | 1077 | PANTHER | - | 9 | 1073 | - | - | |
Lan8g0752 | 1077 | SUPERFAMILY | L domain-like | 379 | 688 | - | - | |
Lan8g0752 | 1077 | Gene3D | Phosphorylase Kinase; domain 1 | 763 | 857 | - | - | |
Lan8g0752 | 1077 | Gene3D | Ribonuclease Inhibitor | 36 | 185 | IPR032675 | - | |
Lan8g0752 | 1077 | ProSiteProfiles | Protein kinase domain profile. | 780 | 1070 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan8g0752 | 1077 | PANTHER | UNNAMED PRODUCT | 9 | 1073 | - | - | |
Lan8g0752 | 1077 | SMART | serkin_6 | 780 | 1056 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan8g0752 | Lan-Chr8 | 9713205 | 9717170 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan8g0752 | 31 | 1071 | Receptor kinase-like Gene Family | AT5G56040 | 44.225 | 0.0 | 838 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Lan8g0752 | Pkinase | 6.8e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan8g0752 | - | - | gmx:100819611 | 1797.33 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan8g0752 | 8 | 9713205 | 9717170 | Lan20g0102 | 20 | 607242 | 611465 | LSH |