Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0752 ATGAAGAATATTGCTCCTCATATTAATAGTGTTACCACTGTGTTATTTTCCTTAGTGTTGTTCTACCTCACCATGACTAAGGTAGAAGTAATAACTTGTCTTTCACTTGATGGAAAGACTCTTCTTTCACTTAAATCATCACCTTTTGTTCTCTCATCATGGAACCCTTCAAGCTCAACACCATGTTCATGGAATGGCATTACTTGTTCTCCACAAGGTAGAGTCATTTCCCTCTCCATTTCAGACACTTTCCTCAACCTTTCTTCTTTGCCTCCTCAGCTTTCATCTCTATCAATGCTTCAACTTCTCAATCTCTCTTCCACCAATGTCTCTGGCTCCATTCCACCCTCTTTTGGCCAACTCTCACATCTTCAAATCCTTGACCTCTCCTCAAACTCTCTCACTGGTTCCATTCCTCATGAACTTGGTAGACTCTCTTCCCTTCAGTTCCTTTTCTTGAACTCAAACAGATTAACAGGAACTCTTCCTCAACAACTTGCTGATCTAACTTCACTTCAGGTTCTTTGCCTTCAAGACAATCTTCTCAACAGTTCAATCCCTTCAAAGTTAGGATCTTTGACATCTCTTCAGCAGTTTAGGATAGGTGGTAATCCATATCTTACAGGACAAATTCCTTCACAGTTAGGCCTACTCTCCAACCTCACCACATTTGGTGCAGCTTCTACTGGACTTTCAGGTTCTATTCCATCTACATTTGGTAACTTGGTCAATCTCCAAACATTAGCACTTTATGATACTGAAATTTCTGGTTCTATACCACCAGAACTTGGGTTTTGTTCTGAGTTGAGAAATCTTTATTTGCACATGAATAAGCTCAGTGGCTATATTCCTCCTCAGTTGAGTAAGCTGCAAAAACTTACTAGCATGCTTCTTTGGGGCAATGCATTATCTGGACCAATCCCAGCTGAGATTTCCAATTGCTCATCACTTGTTATATTTGATGTCTCTTCTAATGAGCTCTCTGGTGAAATACCTAGGGACTTTGGGAAGCTAGTGGTTCTGGAACAGCTTCATCTATCAGACAATTCACTCACAGGTCAAATACCATGGCAGTTGAGTAACTGCACAAGCCTTGCAAGTGTTCAGCTTGACAAGAATCAGTTATCAGGTACAATTCCATTGCAGGTTGGCAAGTTGAAGTTACTGCAGAGTTTTTTCATGTGGGGTAATTCAGTTTCTGGAACCATACCATCCTCTTTTGGTAACTGCACTGAACTCTACGCACTTGACCTTTCGAGGAACAAGCTCACGGGTTCTATTCCTGAAGAGATTTTCAATTTGAAGAAGCTGAGTAAGGTTCTACTTCTTGGAAACTCTTTAACCGGAAGGTTGTCATCAAGTGTTGCAAATTGTGAGTCTTTAGTGAGGTTGAGGGTTGGAGAAAACCAGCTTTCAGGACAGATTCCTAAAGATATAGGCCGACTTCAGAATCTGGTGTTTCTTGACTTGTACATGAATAAATTCTCTGGTAGCTTACCAGTGGAGATTGCTAATATCACAGTTCTTGAGCTTTTGGATGTGCACAAGAACTACTTAACTGGAGAGATTCCATCTCAGATAGGTGAACTTAAAAATTTGGAGCAACTTGATCTCAGTAGAAACATTTTGACAGGTGAAATTCCTTGGAGCTTTGGAAACTTAAGTTATTTGGACAAGCTCATCCTCAACAATAATTTACTGACAGGGTCAATTCCAAAATCCATTAGTAACTTGCAAAAGTTAACTCTATTGGATTTGAGTTACAACAACCTCTCTGGTGGTATACCACCTGAGATTGGTTATGTTACAAGCTTAACCATCAGTTTGGACTTAAGCTCAAATTCATTTACCGGAGAAATCCCAGACTCGATGTCTGCTTTGACACAGTTACAATCACTTGATCTTTCTAATAATATGCTTCATGGAACAATCAAGGTTCTTGGTTCTCTCACCAGTCTCACTTCCCTCAACATCTCCTACAACAACTTCTCAGGTCCTATCCCAGTAACTCCATTCTTCAGAACTCTATCTTCTGATTCATACATTCAGAACTACCATCTATGTCAGTCTATTGATGGAACTACATGTTCTTTAAGTTTCATTCGAAGAAACGGTTTACAAATTGGTAAAACCATAGCTTTGATCTTGGTAATTATAGCTTCAGTTACTATAATTGTCATTGTGTCATGGATTATAGTAACTAGGAATCACAGGTGTAAGGTTGAAAAAACTTTGGGGACATATGGTTCCACATCAGGAGGTGAAGATTTCTCTTATCCTTGGACCTTCATTCCATTTCAAAAGCTAAACTTCAGCATAGGAAACATCTTGGATTGTTTGAAGGATGAGAATGTGATTGGAAAAGGTTGCTCTGGCATTGTGTATAAGGCTGAGATGCCTAATGGAGAGTTGATAGCAGTGAAGAAGCTTTGGAAAGCTAACAAAGAAGATGAAACTGTAGATTCTTTTGCTGCGGAAATTCAGATTCTCGGTTACATCCGGCATAGGAACATTGTGAAGCTTCTAGGCTATTGTTCTAATAGAAGTGTTAAGCTTCTTCTTTATAATTTCATCCCAAATGGTAATCTAAGACAGCTTTTGCAAGGGAACAGGAACTTGGACTGGGAAATTAGATACAAGATTGCTGTTGGAATAGCTCAAGGACTAGCTTACCTTCATCATGATTGTGTCCCTACAATTCTCCACAGAGATGTTAAGTGCAATAACATACTCCTAGATTCCAAATTTGAAGCATATTTGGCAGATTTTGGTCTAGCAAAGCAAATGATTTCACCAACTTATCATCATGCAATGTCCAAAGTTGCTGGTTCCTATGGTTATATTGCCCCAGAGTATGGCTACTCCATGAACATAACTGAGAAGAGTGATGTGTACAGTTATGGAGTGGTGTTGCTAGAGATACTAAGCGGCCGTAGCGCTGTTGAATCGCATGTTGTAGATGGGCAACACATAGTTGAGTGGGTGAAGAGGAAGATGGGAAGCTTTGAACCAGCAGTATCAATACTAGATACAAAGCTACAATGTCTACCAGATCAAATGGTGCAAGAGATGCTCCAAACACTTGGAATTGCTATTTTCTGTGTGAACTCTTCACCGGCCGAGCGCCCCACCATGAAGGAAGTGATTGCACTACTAATGGAGGTGAAGAGTCAACCTGAAGAATTGAATAAAACCTCTCAACCTCTAATAAAACAGACCTCAACTCAATGTTGA 3234 0.3989 MKNIAPHINSVTTVLFSLVLFYLTMTKVEVITCLSLDGKTLLSLKSSPFVLSSWNPSSSTPCSWNGITCSPQGRVISLSISDTFLNLSSLPPQLSSLSMLQLLNLSSTNVSGSIPPSFGQLSHLQILDLSSNSLTGSIPHELGRLSSLQFLFLNSNRLTGTLPQQLADLTSLQVLCLQDNLLNSSIPSKLGSLTSLQQFRIGGNPYLTGQIPSQLGLLSNLTTFGAASTGLSGSIPSTFGNLVNLQTLALYDTEISGSIPPELGFCSELRNLYLHMNKLSGYIPPQLSKLQKLTSMLLWGNALSGPIPAEISNCSSLVIFDVSSNELSGEIPRDFGKLVVLEQLHLSDNSLTGQIPWQLSNCTSLASVQLDKNQLSGTIPLQVGKLKLLQSFFMWGNSVSGTIPSSFGNCTELYALDLSRNKLTGSIPEEIFNLKKLSKVLLLGNSLTGRLSSSVANCESLVRLRVGENQLSGQIPKDIGRLQNLVFLDLYMNKFSGSLPVEIANITVLELLDVHKNYLTGEIPSQIGELKNLEQLDLSRNILTGEIPWSFGNLSYLDKLILNNNLLTGSIPKSISNLQKLTLLDLSYNNLSGGIPPEIGYVTSLTISLDLSSNSFTGEIPDSMSALTQLQSLDLSNNMLHGTIKVLGSLTSLTSLNISYNNFSGPIPVTPFFRTLSSDSYIQNYHLCQSIDGTTCSLSFIRRNGLQIGKTIALILVIIASVTIIVIVSWIIVTRNHRCKVEKTLGTYGSTSGGEDFSYPWTFIPFQKLNFSIGNILDCLKDENVIGKGCSGIVYKAEMPNGELIAVKKLWKANKEDETVDSFAAEIQILGYIRHRNIVKLLGYCSNRSVKLLLYNFIPNGNLRQLLQGNRNLDWEIRYKIAVGIAQGLAYLHHDCVPTILHRDVKCNNILLDSKFEAYLADFGLAKQMISPTYHHAMSKVAGSYGYIAPEYGYSMNITEKSDVYSYGVVLLEILSGRSAVESHVVDGQHIVEWVKRKMGSFEPAVSILDTKLQCLPDQMVQEMLQTLGIAIFCVNSSPAERPTMKEVIALLMEVKSQPEELNKTSQPLIKQTSTQC* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0752 1077 Pfam Leucine rich repeat N-terminal domain 37 70 IPR013210 -
Lan8g0752 1077 Gene3D Ribonuclease Inhibitor 384 699 IPR032675 -
Lan8g0752 1077 SUPERFAMILY RNI-like 90 448 - -
Lan8g0752 1077 Pfam Leucine Rich repeats (2 copies) 628 665 IPR025875 -
Lan8g0752 1077 PRINTS Leucine-rich repeat signature 124 137 - -
Lan8g0752 1077 PRINTS Leucine-rich repeat signature 627 640 - -
Lan8g0752 1077 Pfam Leucine rich repeat 532 591 IPR001611 GO:0005515
Lan8g0752 1077 Pfam Leucine rich repeat 100 158 IPR001611 GO:0005515
Lan8g0752 1077 ProSitePatterns Serine/Threonine protein kinases active-site signature. 900 912 IPR008271 GO:0004672|GO:0006468
Lan8g0752 1077 Gene3D Transferase(Phosphotransferase) domain 1 858 1075 - -
Lan8g0752 1077 ProSitePatterns Protein kinases ATP-binding region signature. 786 809 IPR017441 GO:0005524
Lan8g0752 1077 Pfam Protein kinase domain 782 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0752 1077 ProSiteProfiles Leucine-rich repeat profile. 629 651 IPR001611 GO:0005515
Lan8g0752 1077 SMART LRR_typ_2 410 434 IPR003591 -
Lan8g0752 1077 SMART LRR_typ_2 627 650 IPR003591 -
Lan8g0752 1077 SMART LRR_typ_2 338 362 IPR003591 -
Lan8g0752 1077 SMART LRR_typ_2 242 266 IPR003591 -
Lan8g0752 1077 SMART LRR_typ_2 290 314 IPR003591 -
Lan8g0752 1077 SMART LRR_typ_2 121 145 IPR003591 -
Lan8g0752 1077 SMART LRR_typ_2 169 193 IPR003591 -
Lan8g0752 1077 SMART LRR_typ_2 530 553 IPR003591 -
Lan8g0752 1077 SMART LRR_typ_2 578 602 IPR003591 -
Lan8g0752 1077 Gene3D Ribonuclease Inhibitor 186 281 IPR032675 -
Lan8g0752 1077 Gene3D Ribonuclease Inhibitor 282 383 IPR032675 -
Lan8g0752 1077 SUPERFAMILY Protein kinase-like (PK-like) 761 1052 IPR011009 -
Lan8g0752 1077 PANTHER - 9 1073 - -
Lan8g0752 1077 SUPERFAMILY L domain-like 379 688 - -
Lan8g0752 1077 Gene3D Phosphorylase Kinase; domain 1 763 857 - -
Lan8g0752 1077 Gene3D Ribonuclease Inhibitor 36 185 IPR032675 -
Lan8g0752 1077 ProSiteProfiles Protein kinase domain profile. 780 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0752 1077 PANTHER UNNAMED PRODUCT 9 1073 - -
Lan8g0752 1077 SMART serkin_6 780 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0752 Lan-Chr8 9713205 9717170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0752 31 1071 Receptor kinase-like Gene Family AT5G56040 44.225 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan8g0752 Pkinase 6.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0752 - - gmx:100819611 1797.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0752 8 9713205 9717170 Lan20g0102 20 607242 611465 LSH