Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0746 ATGGGTGCGGCTTTAGAATCTGGTTCTGCTGATTGTTTGAGCAAAGTGATGTCGTCGATGCCTGGTTTTCGTTTCCATCCCACTGATGAGGAACTTGTCATGTACTATCTTAAGAGGAAGATTTGTGGGAAAAGGTTGAAGCTTGATGTGATTTACGAAACTGATGTGTACAAGTGTGATCCTGAGGAGTTGCCTGGGCTTTCTGTACTAAAAACTGGAGATAGGCAATGGTTCTTTTTCTGTCGTAGAGATAGGAAGTATCCTAATGGTGCAAGGTCTAATCGAGGAACTAGACGTGGGTACTGGAAAGCAACAGGAAAAGATCGTAATGTGACCTGCAATAATCGGGCAGTTGGAGTGAAAAAGACACTGGTTTTCTATAGAGGAAGAGCTCCTAGTGGTGAGCGGACTGATTGGGTTATGCATGAATACACCATGGATGAAGGTGAACTTCAGAGATGCCAGGGTGTTGAGGACTATTATGCTCTCTACAAAGTTTTCAAGAAAAGTGGACCTGGTCCTAAAAATGGTGAACAGTACGGCGCTCCATTTAAAGAAGAAGAGTGGGCTGATGACAACATTGTAGATTTTAGCATTAGCTCAGCTGATCGTGAAGTTGATATTCCCAATACTGCCACTGTTAGTTATAACCAGCTGCAGCCTTTGTTAGATGATGAAATTGGGGACGTTATTAACGGAATGTTGGATTATGAGCTTTTCCTTGACCAGCAACATGTGATTGATCATCCTGGCTTTCCTCTGGTTGTTTCTGAAGAAACACAAAGTACTGTGGTGGATCAATTCTCTGATGCTGTATTCCCTGAGCCAAGTGGTGGTATCTTTCACTCGGTCGGCCAGCCTCGTGATTTGCTGCCTAGCTTTGACTTCAACCAATCTGTAGTTACTTCTCATTTGCATGTTTCTGAAGCACCTGAGGTTACTTCCACTCCCAACATTCAAATTGAAGAGTTCCACTTTTGTGAGGAAGACTTCTTGGAAATTAATGATCTCATTGGTAGTGAACCTACACTGTCAAATGTGGAAAACCCTTTTGAGAGCCTGCAATTTGAAGATGGGTTAAGTGAATATGATCTGTTCCAAGATGCAGAGATGTTTCTTCCCGAATTGGGATCAATCACTCAGGCTACCGTTTCACATGCATCCATGAATTCCCTACACAGCAATGTTCAAAGTCAAAATTATCACTGGCAGCCCAATCCAGATGATGCAAATCTAACTGGCGCCGAATTCTGGATGCATGGTGAAAGAAATACCCCGATTCAAGCTGAAGTCTCTTTTGATTCTTCCTCTCTACCAACCACAGGTATTGTATGTGAATCTGCCAGTTTTCTGGCTGAAGGCAATGACAATAAAAGTAGCATGGTGGAAGATGTTGCTACAAGTGGATTCTCCTCCGCTCTCTGGGCATTTGTTGAGTCAATACCTACCACTCCTGCATCGGCTGCGGACAATGCTTTGGTGAACCGGGCATTGAGTCGAATGTCTAGCTTCAGCAGGGTGAAGATTAATCACAAACACACTAACATTGCCGGGGAAGGTAAAGACACACCAACTGTAAAGAGAGCAAGCAGAAACAGGGTTTTATTCCTTTCCTTCCCAATTATTATTGCTTTATGTGCTTTCTTGTGGATTTCTGTTGGAACCTTACGAGTTCTGGGGAGATGCATCTCTCCTTAA 1698 0.4329 MGAALESGSADCLSKVMSSMPGFRFHPTDEELVMYYLKRKICGKRLKLDVIYETDVYKCDPEELPGLSVLKTGDRQWFFFCRRDRKYPNGARSNRGTRRGYWKATGKDRNVTCNNRAVGVKKTLVFYRGRAPSGERTDWVMHEYTMDEGELQRCQGVEDYYALYKVFKKSGPGPKNGEQYGAPFKEEEWADDNIVDFSISSADREVDIPNTATVSYNQLQPLLDDEIGDVINGMLDYELFLDQQHVIDHPGFPLVVSEETQSTVVDQFSDAVFPEPSGGIFHSVGQPRDLLPSFDFNQSVVTSHLHVSEAPEVTSTPNIQIEEFHFCEEDFLEINDLIGSEPTLSNVENPFESLQFEDGLSEYDLFQDAEMFLPELGSITQATVSHASMNSLHSNVQSQNYHWQPNPDDANLTGAEFWMHGERNTPIQAEVSFDSSSLPTTGIVCESASFLAEGNDNKSSMVEDVATSGFSSALWAFVESIPTTPASAADNALVNRALSRMSSFSRVKINHKHTNIAGEGKDTPTVKRASRNRVLFLSFPIIIALCAFLWISVGTLRVLGRCISP* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0746 565 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 18 564 - -
Lan8g0746 565 Gene3D NAC domain 28 171 IPR036093 GO:0003677|GO:0006355
Lan8g0746 565 PANTHER NAC TRANSCRIPTION FACTORS 2 18 564 - -
Lan8g0746 565 SUPERFAMILY NAC domain 16 169 IPR036093 GO:0003677|GO:0006355
Lan8g0746 565 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Lan8g0746 565 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0746 Lan-Chr8 9685146 9689183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0746 6 563 NAC Transcription Factor Family AT1G34190 43.266 6.55e-134 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan8g0746 NAM 3.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0746 - - gmx:100794925 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0746 8 9685146 9689183 Lan4g1801 4 26638437 26642356 LSH