Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0739 ATGCCAACACCAACATTAACAACAATATGTGTAGATACTCCGAATGGAGACTCATCCGAACACACCCGTCCTCAATCGCGTCACATTCAACCTTTTATGTCTCCTTCTTACTCAATCACTCTCAAGTTCATGGACGTGAGCTATCGAGTGAAAAAGATAGATAACAAAACAAGCAAAAGAAGTTGTATTAAGAGTTTCTTCACAACTCATGACTCACCACCACCGTCAGATCAAATTAGATCAACGGAAGAGAAAACCATTCTGCATTCTGTAACGGGAATAGCGTACCCAGGAGAGATCTTAGCCATTCTTGGTCCATCAGGGAGTGGAAAATCAACGCTCCTAAATGCACTCGCAGGGAGGCTCCATGGACACGCTCTCACTGGAACAATCCTCGCTAACTCTTCAAAACTCAACAAACCGGTTCTCCGTCGAACCGGGTTCGTTACCCAAGACGACATTCTCTACCCTCACCTCACGGTTCGGGAGACTCTCGTCTTCTGCTCCATGCTCCGCCTTCCCAGGACTCTGCCGCGAGAAACAAAGCTCGCTGCGGCAGAGTCCGTGATGGCGGAGCTAGGGCTATTGAAGTGTGAGGACACCATAATTGGAAACAGCTTCATCCGAGGCGTTTCCGGTGGTGAAAGGAAGCGCGTGAGTATTGCACATGAGATGTTGGTTGATCCGAGTTTGTTGATCCTGGATGAGCCGACCTCCGGGCTGGACTCGACGGCGGCGTACCGGTTGGTGACGACGCTGGGAGCATTGGCGAAGAAAGGGAAGACGGTGGTGACGTCAGTGCATCAACCGTCGAGCCGCGTGTATCAGCTGTTTGATAAGGTGCTGGTGTTGTCGGAAGGACAGTGCTTGTACACCGGAAAAGGAAGCGAAGCAATGAGATACTTTGAATCGGTAGGGTTCGCTCCATCTTTTCCGATGAATCCGGCGGATTTTCTGCTTGATCTCGCTAACGGTGTTTGCCATGTTGATGGTGTGAGTGAAAGAGATAGGCCAAACATTAAGCAGAACCTGGTTCATTCATACAACACAATACTGGCTCCTAAGGTAAAAGCTGATTGCATGGACACTGCAAGTATTCCTAACAAAAACACTCACCCTTTAAGAAGCAACCCTTCCAAACAATGTAGACATAGTGACAGGGTTAGCTTGTTTGATTGGTTCAACCAATTCAGTATTCTACTACAAAGAAGCATCAAAGAAAGAAAACATGAATCCTTCAACACTCTTAGAGTCTTTCAAGTTCTTGCTGCTGCACTATTAGCTGGTTTAATGTGGTGGCACTCAGACTATAGGAACATTCAAGATAGGCTTGGCCTGCTCTTTTTCATTTCCATCTTTTGGGGAGTCTTTCCATCTTTCAACTCGGTTTTTGCATTTCCTCAAGAACGTGCCATATTTATGAAAGAGAGGGCTTCTGGTATGTACACATTGTCATCCTATTTTATGGCTAGAATTGTTGGAGACCTTCCTATGGAGCTTATTCTTCCCACTGTTTTCCTCTCTGTGACATATTGGATGGGTGGATTAAACCCTGATTTGTGGTCCTTTGTGTTGACTTTGTTGGTTGTTCTTGGATATGTTCTTGTGTCACAAGGTCTTGGACTTGCTTTAGGTGCTGCAATCATGGATGCAAAGCAAGCTTCCACAGTAGCAGCAGTGACAATGTTAGCATTTGTCTTAACAGGTGGATACTATGTGCATAAGGTGCCACATTATATGGCTTGGATCAAATACATATCAACAACCTTTTACTCTTATAGGTTACTGACTAAAATCCAATATGGTAATGGCAACAAAATCTTAAGCTTATTGGGTTGCCATCATGGTGGTAGTGATAGGGCTAGATGCAAGTTTGTTGAAGAAGATGTAGTGGGACAAATTGGCACTGTAGGAAGCATTGGAGTGTTGTTTCTCATGTTTGTGGGTTATAGAATATTGGCTTACCTTGCATTGAGGAGCATCAAGAGTTGA 1992 0.4503 MPTPTLTTICVDTPNGDSSEHTRPQSRHIQPFMSPSYSITLKFMDVSYRVKKIDNKTSKRSCIKSFFTTHDSPPPSDQIRSTEEKTILHSVTGIAYPGEILAILGPSGSGKSTLLNALAGRLHGHALTGTILANSSKLNKPVLRRTGFVTQDDILYPHLTVRETLVFCSMLRLPRTLPRETKLAAAESVMAELGLLKCEDTIIGNSFIRGVSGGERKRVSIAHEMLVDPSLLILDEPTSGLDSTAAYRLVTTLGALAKKGKTVVTSVHQPSSRVYQLFDKVLVLSEGQCLYTGKGSEAMRYFESVGFAPSFPMNPADFLLDLANGVCHVDGVSERDRPNIKQNLVHSYNTILAPKVKADCMDTASIPNKNTHPLRSNPSKQCRHSDRVSLFDWFNQFSILLQRSIKERKHESFNTLRVFQVLAAALLAGLMWWHSDYRNIQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMARIVGDLPMELILPTVFLSVTYWMGGLNPDLWSFVLTLLVVLGYVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPHYMAWIKYISTTFYSYRLLTKIQYGNGNKILSLLGCHHGGSDRARCKFVEEDVVGQIGTVGSIGVLFLMFVGYRILAYLALRSIKS* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0739 663 Pfam ABC-2 type transporter 396 601 IPR013525 GO:0016020|GO:0140359
Lan8g0739 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 304 IPR027417 -
Lan8g0739 663 SMART AAA_5 97 288 IPR003593 -
Lan8g0739 663 Pfam ABC transporter 90 239 IPR003439 GO:0005524
Lan8g0739 663 Pfam ABC-2 type transporter 268 343 IPR043926 GO:0140359
Lan8g0739 663 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 19 661 - -
Lan8g0739 663 Gene3D - 78 305 IPR027417 -
Lan8g0739 663 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 661 - -
Lan8g0739 663 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 311 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0739 Lan-Chr8 9625537 9630348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0739 80 325 Calmodulin-binding Proteins AT2G36910 27.076 1.13e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0739 K05681 - gmx:100812127 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0739 8 9625537 9630348 Lan20g0116 20 695189 701006 LSH