Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0734 ATGACATTAACTCAAATTTCTGAGAGACCATCAATGAATTTGGAATCTTGTGTCCCTCCAGGATTTAGATTTCATCCAACAGAAGAAGAACTTGTGGGGTATTACCTCAAGAGGAAAATAAACTCGCTTAAAATCGACCTAGATGTGATTGTTGAGATTGATCTCTACAAAATTGAACCATGGGACATACAAGATAGATGCAAGCTAGGATATGAGGAACAAAATGAGTGGTACTTTTTCAGTCACAAAGATAAGAAGTATCCAACAGGAACAAGAACTAATAGGGCTACTGTGGCTGGGTTTTGGAAAGCAACAGGAAGGGACAAAGCTGTGATGTCCAAAAACAGAATAATAGGAATGAGAAAGACCCTTGTCTTCTATAAGGGACGTGCCCCAAATGGAAGGAAAAGTGATTGGATCATGCATGAGTATAGGCATCAAACCTCAGAACATGCTCCTCCACATGAAGAAGGATGGGTTGTATGCCGAGCCTTTAGAAAGCCTACTCCGAGTCAGAGACCAGGTTTTGAACCATGGTGTAATAGTAGCCAACACCAACACTATTTCAGAGATCAAAGCCATGCAAGGCCATTAACAATTGCTGATATTTTAAATGAAACTCATAATGTGCTTCATTCTACTGAAGACACTAGTTTTAACAGTTTCCCCTTTAGCTCAGAGCAACAAGAGTTTCTACCAAACCAAAATGTTATTATGGATCACAAACAACTCATTGAGCTTCCACAACTAGATAGTCCCACTGCATCTCTATCAGCAACTTTGGCAATAAAAGAATGCAACCAATTACAATATCACAATAATAATGGCCTAACAATTGAAGAATATTGCAGTGATGAAAGGTGCAATAATAATAACAATGGACAAGTTGGTGGTGTTGATTGGAAAAGCTTGGATAATTTGTTTGCTTCACAATTGACAGATTCTTCAGAAGTTTATTTTTCACATCAAAACTTGCCATTGATGATGCCACATAGCCATGATCTACAAGCTCAAAACCAAGCTAGTAACATCTTAGGATGTTTTCCTGATTTATAA 1056 0.3797 MTLTQISERPSMNLESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKIEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGRKSDWIMHEYRHQTSEHAPPHEEGWVVCRAFRKPTPSQRPGFEPWCNSSQHQHYFRDQSHARPLTIADILNETHNVLHSTEDTSFNSFPFSSEQQEFLPNQNVIMDHKQLIELPQLDSPTASLSATLAIKECNQLQYHNNNGLTIEEYCSDERCNNNNNGQVGGVDWKSLDNLFASQLTDSSEVYFSHQNLPLMMPHSHDLQAQNQASNILGCFPDL* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0734 351 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 16 326 - -
Lan8g0734 351 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 326 - -
Lan8g0734 351 SUPERFAMILY NAC domain 15 167 IPR036093 GO:0003677|GO:0006355
Lan8g0734 351 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
Lan8g0734 351 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Lan8g0734 351 ProSiteProfiles NAC domain profile. 18 167 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0734 Lan-Chr8 9585848 9589633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0734 14 350 NAC Transcription Factor Family AT1G71930 54.598 3.08e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan8g0734 NAM 2.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0734 - - gmx:100811057 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0734 8 9585848 9589633 Lan20g0120 20 718824 721589 LSH
Lan8g0734 8 9585848 9589633 Lan4g1782 4 26512588 26516292 LSH