Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0731 ATGGAAGATTCAGATGAAGATGAGCTTCTGAATCTCACCCTTTCAGTTGCTGCTGATAGAGAAAGAAAAAAGAAGGGAAAGATAAAAATAAGGGATGATAATATTGCTTGTTCTATTAGTACTACTACTACTCATAATATGAACCCTTATTATGAGGAAGGGTATGAAGGGAAGATCTATAGGCTACTCCAAATGAGGGATCAAATGCTAAGACAAGACCATAGAATAAGGAATAAAGGAGTTGTTGATGAAGATGGAAATGGCCTTCCATTGATTCATTTGCTTCTAACAACTGCTACTTTAGTTGATGAAAACAATGACAACAAAAACAAGTTTGGTTCAGCTTTAGAGAACATCACTGAACTCTATAAGATTGTTTCTATAACAGGTGATTCAGTTCAACGTGTAGTGGCATATTTCACTGATGGCTTGGTGGCAAGGCTTCTCACAAGAAACTCACCCTTCTATGACATGCTCATGGAGGAACCAACAACTGAGGAAGAGTTTCTTGCATTCACAAATCTCTATAGAGTCTCACCTTATTACCAATTTGCTCATTTCACTGCAAACCAAGCTATCTTGGAAGTGTTTGAGAAAGAAGAAGACAAGAACAACCGTGCTCTTCATGTTGTTGATTTTGATGTCTCCTATGGTTTTCAATGGCCTTCTCTTATTCAATCACTTTCTGAGAAGGCAACAAGTGGAAACAGAATATCACTCAGGATAACTGGATTTGGAAAGAACTTGAAGGAACTTCAAGAAACTGAGTCTAGGTTGATTAGTTTCTCAAAGGGTTTTGGTAACCTTGTGTTTGAGTTTCAAGGGTTGTTGAGAGGGTCAAGGGTGATAAACCTAAGGAAGAAGAAGAATGAAACTGTGGCAGTGAACTTGATTTCTTATTTGAACACTTTGAGTTGTTTCATGAAGATCTCTGACACATTGGGATTTGTACATTCTTTTAACCCTTCCATTGTTGTGTTGGTGGAACAAGAAGGTAGTAGGAGTCCTAATAGGACCTTCTTGTCAAGATTCACAGACACTTTGCATTACTTTGCAGCAATGTTTGATTCACTTGATGATTGTCTTCCACTTGAGAGCACTGAAAGGTTCAGGATTGAGAAAAAGCTTCTAGGGAAAGAGATCAAAAGCATGCTCAACTATTATGACATGGATGGTGTAGATTGTCCCAAATATGAAAGGATGGAAACATGGAAAGCAAGAATGGAGAATCATGGGTTTGTTGGCACCAAAATAAGCTCAAAATCCATGATCCAAGCAAAACTTCTTTTGAAGATGAGAACTCATTATTGTCCACTACAATTTGAGGAAGAAGGAGGTGGTGGTTTCAGAGTTTCTGAAAGAGATGAAGGAAGAGCTATCTCTTTAGGGTGGCAGAATACTTTTCTGCTAACAGTTTCAGCATGGAAACCAATCTGA 1437 0.3814 MEDSDEDELLNLTLSVAADRERKKKGKIKIRDDNIACSISTTTTHNMNPYYEEGYEGKIYRLLQMRDQMLRQDHRIRNKGVVDEDGNGLPLIHLLLTTATLVDENNDNKNKFGSALENITELYKIVSITGDSVQRVVAYFTDGLVARLLTRNSPFYDMLMEEPTTEEEFLAFTNLYRVSPYYQFAHFTANQAILEVFEKEEDKNNRALHVVDFDVSYGFQWPSLIQSLSEKATSGNRISLRITGFGKNLKELQETESRLISFSKGFGNLVFEFQGLLRGSRVINLRKKKNETVAVNLISYLNTLSCFMKISDTLGFVHSFNPSIVVLVEQEGSRSPNRTFLSRFTDTLHYFAAMFDSLDDCLPLESTERFRIEKKLLGKEIKSMLNYYDMDGVDCPKYERMETWKARMENHGFVGTKISSKSMIQAKLLLKMRTHYCPLQFEEEGGGGFRVSERDEGRAISLGWQNTFLLTVSAWKPI* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0731 478 ProSiteProfiles GRAS family profile. 82 476 IPR005202 -
Lan8g0731 478 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 476 IPR005202 -
Lan8g0731 478 PANTHER OSJNBA0084A10.13 PROTEIN 8 476 - -
Lan8g0731 478 Pfam GRAS domain family 91 476 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0731 Lan-Chr8 9560170 9561699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0731 119 477 GRAS Transcription Factor Family AT3G54220 33.696 2.00e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan8g0731 GRAS 9.3e-86 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0731 - - gmx:100813979 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1043 7 11111671 11113241 Lan8g0731 8 9560170 9561699 PCT
Lan8g0731 8 9560170 9561699 Lan7g1043 7 11111671 11113241 PCT