Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0714 ATGGTGGGACTTAACTTCATGGACGAGTTAGACTGTGGAAGCTTCTTTGACCAAATCGACGACCTCCTTGACTTCCCCGTCGAAGATGTCGTCGACGGCACCACCACCACCACCACCACCGCCTTGCCCGCCGTCTCAGCTTCCGGAAACTGCAACTCCCTAGCTAGCATCTGGCCACCGCAGTCAGAGTCATTCCCCTGCTCCGACTCCATTTTCTCCGGCAAAAGCGCTCCTGACCTCTCGGCCGAGCTTTCAGTTCCGTATGAAGATATTGTACAATTGGAATGGCTGTCCAACTTTGTGGAGGACTCATTCTCCGGTGGAAGCCTCACCATGAACAAAGTGGAGCAACCATCTTGCACCACCACTACCACCACCTCTACCAAGGAGGACACATCATCAGTTCATAGCCAATTCCAGACATCAAGCCCGGTGTCTGTCCTCGAAAGCAGCAGCTCCTACTCTGGTGGTAAGACAATCCCTCGCAGCCGCCCGGAGATTTACATCCCTGTGCCTTGTGGACGTGCACGCAGCAAGCGTCCACGCCCGGCTGCCTTCAACCCTTGCCCGGCTATGCAGCTCATCTCCCCTGCTTCCTCTTTCCTTGGGGAGAACATGCAGCCTAATGTTATTATTTCCACCAAGGCATCTTCAGATTCAGAGAATTTTGCTGAGTCTCAACCTGTGACGAAGATGCGGAAACAAGGCTCTGGGGAGCATAAGAAGAAAAAGAAAATCAAACCATCACTTCCATCAGCTCCAGCAGCTGATGATACTAGCCAGAATGGTTCACAAGCAGTTAGGAAATGCATGCATTGTGAGATAACTAAGACACCACAGTGGAGGGCAGGGCCAATGGGCCCGAAAACACTCTGCAATGCATGTGGCGTTCGCTACAAGTCCGGTCGGCTTTTCCCCGAATACCGTCCCGCTGCTAGTCCAACGTTTTGTCCATCCGTGCACTCCAATTCTCATAAGAAGGTCCTGGAAATGAGATACAGGAGTATTGAGGAAACTGGTTTTGAAACCCATTCAGCTGCTTCTCCAGAACTCATTCCAAATACTAATAGCAGCATCCTTACCCTTGAATACATGTGA 1098 0.5137 MVGLNFMDELDCGSFFDQIDDLLDFPVEDVVDGTTTTTTTALPAVSASGNCNSLASIWPPQSESFPCSDSIFSGKSAPDLSAELSVPYEDIVQLEWLSNFVEDSFSGGSLTMNKVEQPSCTTTTTTSTKEDTSSVHSQFQTSSPVSVLESSSSYSGGKTIPRSRPEIYIPVPCGRARSKRPRPAAFNPCPAMQLISPASSFLGENMQPNVIISTKASSDSENFAESQPVTKMRKQGSGEHKKKKKIKPSLPSAPAADDTSQNGSQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPSVHSNSHKKVLEMRYRSIEETGFETHSAASPELIPNTNSSILTLEYM* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0714 365 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 268 327 - -
Lan8g0714 365 MobiDBLite consensus disorder prediction 214 233 - -
Lan8g0714 365 ProSitePatterns GATA-type zinc finger domain. 270 295 IPR000679 GO:0006355|GO:0043565
Lan8g0714 365 ProSiteProfiles GATA-type zinc finger domain profile. 264 300 IPR000679 GO:0006355|GO:0043565
Lan8g0714 365 PANTHER GATA TRANSCRIPTION FACTOR 8 1 364 - -
Lan8g0714 365 CDD ZnF_GATA 269 326 IPR000679 GO:0006355|GO:0043565
Lan8g0714 365 MobiDBLite consensus disorder prediction 121 141 - -
Lan8g0714 365 SMART GATA_3 264 314 IPR000679 GO:0006355|GO:0043565
Lan8g0714 365 PIRSF Txn_fac_GATA_plant 1 358 IPR016679 GO:0003677|GO:0005634|GO:0045893
Lan8g0714 365 Pfam GATA zinc finger 270 303 IPR000679 GO:0006355|GO:0043565
Lan8g0714 365 Gene3D - 263 314 IPR013088 GO:0006355|GO:0008270
Lan8g0714 365 PANTHER GATA TRANSCRIPTION FACTOR 1 364 - -
Lan8g0714 365 MobiDBLite consensus disorder prediction 214 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0714 Lan-Chr8 9247498 9250732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0714 19 332 C2C2-Gata Transcription Factor Family AT4G32890 34.985 9.55e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lan8g0714 GATA 6.4e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0714 - - lang:109354556 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0714 8 9247498 9250732 Lan20g0152 20 953609 957977 LSH