Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0711 ATGGGAATTTCATTGAACCTTTGTAATGGTAACAGTACTATAACTCATGAAGACCCACTGAATTGGAACAAAGCTGCTGATGCTTTGAAAGGTAGCCATTTTGATGAGGTCAAGCGCATGGTGGAGGAGTACCGGAGGCCAGTGGTGAAGTTAAGTGGTGAGAACCTCACCATAGCTCAGGTGGCAGCAGTTGCAGGCCACCACCGTGCTGTGACGGTGGAGCTGGCGGAGAAGGCACGTGGCGGTGTTAAGGCTAGTAGCCAGTGGATATTGGACAGTATTAAGAATGGGACAGATTGCTATGGAGTTACCACTGGGTTTGGTTCTAGCTCACATAGAAGAACAAATCAGGGTGGTGCCCTACAAAATGAACTCATAAGATTCTTGAATGCTGGCATTTTTGGCAATGGCACAGAATCCAAGCACATCTTATCTCACTCAGCCACAAGAGCAGCCATGCTTGTTAGGATCAACACCTTGCTTCAAGGATATTCAGGAATCAGATTTGAAATCATGGAAGCAATAGCCAAATTCCTGAACCAAAACATAATTCCATGCCTCCCTCTAAGGGGTACAATCACTGCATCAGGTGACCTTGTCCCTTTGTCATATGTTGCTGGTCTTTTGATTGGAAGGCCAAACTCCAAGTCTATTGGACCTGATGGAAAAGTTCTTAATGCCGAAGAGGCCTTTGAGCTAGCTGGAATTGAAGGTGGTTTCTTTAAGTTGCTACCTAAAGAAGGTTTGGCATTACTGAATGGCACTGCAGTCGGATCTGGTTTAGCTTCAAAGGTTCTTTTTGATGTACACATACTTGTTATCCTCTCAGAAGTGATGTTTGCGATTTTCGCCGAAGTTATGCATGCGAAACTAGAATTCACAGACCACTTGACACATAAATTGAAGCACCACCCTGGCCAAATTGAGGCTGCAGCAATAATGGAACATATTTTGGATGGAAGTGCATATTTTAAGGTTACAGATGAGATTTATTCTCTTCAGAAGCCTAAACAAGATAGGTATGCTCTTAGAACATCACCTCAGTGGCTTGGACCACAGATTGAAGTAATAAGGCATTCAACAAGGATGATTGAGAGGGAGATAAACTCTGTCAATGACAACCCCTTAATTGATGTTTCAAGGAATAAAGCAATTCATGGAGGGAATTTCCAAGGCACCCCTATTGGTGTTTCAATGGATAACACACGTTTGGCCATTGCTTCAATTGGTAAACTTATGTTTGCTCAATTCTCTGAGCTTGTGAATGATTACTACAGCAATGGTCTTCCTTCAAATCTTACAGCTAGCTCCAACCCAAGTTTGGATTATGGCTTCAAAGGTGCAGAAATTGCAATGGCATCCTACTGCTCAGAACTTCAATACCTTGCTAATCCTGTCACCACTCATGTTCAAAGTGCTGAGCAACACAACCAAGATGTGAACTCTTTAGGCTTGATTTCATCAAGAAAAACATCTGAAGCAGTGGACATATTAATGCTCATGTCCTCAACTTTCCTAGTTGCATTGTGCCAAGCCATTGATTTGAGGCACTTGGAGGAGAATTTGAAGAGTTGTGTGAAGAACACTGTGAGTCAGGTTGCAAAGAGGGTCCTCACAATCCATACCAATGGTGACTTGCTCAAAGTTGTTGACCAGGAGCATGTGTTTGCTTACATTGATGACCCATGCAATGCAAAATACCCTTTAATGCAGGAGTTGAGAAGGGTACTATTTGATCATGCATTGAATAATAGTGATAATGAGGTGAATCCAAGGACCTCAATATTCCAAAAGATAGGAGCTTTTGAGGAAGAGCTCAAGACCCTTTTGCCTAAGGAAGTGGAAAATGCAAGGGTTGAAGTTGAGAAAGGAAATCCTGTTGTTGCTAACAGGATTAAGGAATGTAGGTCTTATCCACTTTACAAGTTTGTTAGAGAAACTTTGGGTACATCTTTGCTTACAGGTGAGAAAGTAAGGTCACCAGGTGAGGAATGTGATAAGGTATTCTCTGCATTGAGTGAAGGGAACTTCATTCATCCTCTTTTGGACTGCCTAAAGGAGTGGAATGGTGAACCTCTACCACTACATTAG 2091 0.4247 MGISLNLCNGNSTITHEDPLNWNKAADALKGSHFDEVKRMVEEYRRPVVKLSGENLTIAQVAAVAGHHRAVTVELAEKARGGVKASSQWILDSIKNGTDCYGVTTGFGSSSHRRTNQGGALQNELIRFLNAGIFGNGTESKHILSHSATRAAMLVRINTLLQGYSGIRFEIMEAIAKFLNQNIIPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPDGKVLNAEEAFELAGIEGGFFKLLPKEGLALLNGTAVGSGLASKVLFDVHILVILSEVMFAIFAEVMHAKLEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYFKVTDEIYSLQKPKQDRYALRTSPQWLGPQIEVIRHSTRMIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDYYSNGLPSNLTASSNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTSEAVDILMLMSSTFLVALCQAIDLRHLEENLKSCVKNTVSQVAKRVLTIHTNGDLLKVVDQEHVFAYIDDPCNAKYPLMQELRRVLFDHALNNSDNEVNPRTSIFQKIGAFEEELKTLLPKEVENARVEVEKGNPVVANRIKECRSYPLYKFVRETLGTSLLTGEKVRSPGEECDKVFSALSEGNFIHPLLDCLKEWNGEPLPLH* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0711 696 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 18 686 IPR005922 GO:0005737|GO:0006559|GO:0016841
Lan8g0711 696 Gene3D - 519 630 IPR023144 -
Lan8g0711 696 Gene3D Fumarase/aspartase (Central domain) 256 690 - -
Lan8g0711 696 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 191 207 IPR022313 GO:0016841
Lan8g0711 696 Pfam Aromatic amino acid lyase 56 524 IPR001106 -
Lan8g0711 696 Gene3D - 9 255 IPR024083 -
Lan8g0711 696 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 9 695 - -
Lan8g0711 696 SUPERFAMILY L-aspartase-like 17 695 IPR008948 GO:0003824
Lan8g0711 696 PANTHER HISTIDINE AMMONIA-LYASE 9 695 IPR001106 -
Lan8g0711 696 CDD PAL-HAL 54 516 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0711 Lan-Chr8 9202207 9206570 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0711 3 695 Monolignol Biosynthesis Gene Families AT3G53260 74.334 0.0 1092
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0711 K10775 - gmx:100801470 1127.85