Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0709 ATGGGCATTCCGGAAAACATAGTTGTCGGTTCCCATGTTTGGGTTGGAGATCCAGAATTAGTTTGGATTGATGGACAAGTACTGAATATTAATGGAGATGAAGCTGATATTCAAGCTAGCAATGGGAAGAAGGTTGTTTCCCGTTTATCAAAATTACATCCCAAGGACACGGAGGCTCCTACTGATGGAGTTGATGACATGACCAAGCTTGCATATTTGCATGAGCCAGGGGTGCTGCATAATTTGGAAATTAGATACAAGATGAACGAAATATATACTTACACTGGAAATATTCTTATTGCGATCAATCCGTTCCAAAGTCTTCCAGACCTGTATGATGCAAATATGATGAAACACTACAAGGGAGCAACATTGGGAGATTTGAGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGGGCAATGATTACCGACGAGAAAAGTAATTCTATCCTGGTCAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACCACCAAAATGCTTATGTGTTACCTAGCATATTTGGGTGGTCGCGTTGCATCTGAAGGAAGGACTGTTGAACAACAAGTTCTTGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAAACTGTTAGAAATAACAATTCCAGCCGTTTCGGAAAATTTGTTGAGATTCAATTTGATAAGTATGGACGAATATCTGGTGCAGCCATTAGAACTTATCTGCTAGAGAAATCTCGAGTTTGCCAAATATCAGATCCCGAGCGTAACTATCACTGTTTTTACCTTCTTTGTGCTTCTCCCCCCGAGGAAAAGGAGAAATATAAGTTGGGAGATCCTAGAGCATTTCACTACCTAAATCAATCCAGTTGCTATGAATTAGCTGGTGTTAATGCTGCTCAAGAATATCTTAGCACCAAAAGAGCCATGGATATTGTGGGAATCAGTCAGGAAGAGCAGGATGCAATTTTCAGAGTTGTAGCTGCTATTCTTCATATTGGAAACATTAAGTTTGCAAAATCAGAAGAAACAGATTCATCGGTTCTTGAAGATGAAGAGTCTAAGTTTCATCTCCAAACAACAGCAGAACTTCTAATGTGTGATCCTAATGCTTTGGAAGATGCACTTCGTAAGCGTGTGATGATTACCCCAGAAGAAATTATCATGAGAAGTCTTGATCCTATTGGTTCAACAGTTAGTAGGGATGGTTTAGCAAAGACACTATATTCTCGTTTATTTGACTGGTTAGTCTATAAAATTAATGTCTCCATTGGGCAGGATCCTACCTCAAAATTTCTCATTGGCGTTCTTGACATATACGGCTTTGAAAGTTTTGTTTCTAATAGTTTTGAGCAGTTTTGTATTAATTTCACAAATGAAAAGCTGCAGCAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAACAATATACAAAAGAAGGGATTAACTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTACTGGATCTTATTGAAAAGAAACCGGGTGGAATCATTGCTCTGCTTGATGAAGCTTGTATGTTTCCAAAATCAACTCATGAAACATTTTCGCAAAAGCTTTATCAGACGTTCAAAGATCACAAACGCTTCATCAAGCCAAAATTGGCACGCTCGGACTTCACTGTTGTTCATTATGCAGGGGAGGTCCAGTATCGGTCTGAGCTGTTTTTAGACAAAAACAAAGACTATGTTGTTCCTGAACATCAAGACATGCTAAGTGGTTCCAGATGTTCATTTGTATCAGGCCTTTTCCCCCCACTTTCTGAGGAGACAGCCAAATCTGCTAAGTTTTCTTCTATTGGTTCTCGTTTTAAGCTACAATTACAACAATTGATGGAAACTCTCAATCTGACAGAACCCCACTATATTAGGTGTGTGAAGCCAAATAATCTATTACAACCTGGAATTTTTGAGAATATGAATGTCATCCAACAATTACGTTCTGGTGGTGTTCTTGAAGCAGTACGAATTAAATGTGCTGGATTTCCCACTCATAGGACTTTTCATGATTTTTTAACTCGAGTAGGAATTCTTGCTCCAGAGGTCCTTCTAGGGAACTTCAATGAAAAAGATTCTTGTAAAATGATTTTGGAGAAGATTGGCCTATCAGGTTATCAGATAGGGGAGACACAAATATTCCTAAGAGCTGGTCAGATGGCTGAGTTGGATGCGCAGAGAGCACGCCTGCTTAACAATTCTGCAACAATTATCCAGAAGCAGATTAAAACTCATTTTAGTAGGAAAACTTATGTTGCATTGTGGAAGTCCTCTGTCTTTATCCAATCCATTTGTAGAGGGGAATTGGCTCGGAGGTCATATTATCACATGAAGAGGGAGGCAGCTGCAGTTAGAATTCAATCATATATGCGAGGAAAACTAGCCAGAAAGAAGTACACTGAGATAAAGATTTATGTCATCATCTTGCAGACAGGTTGTCGAGCAATGGTTGCTCGAGATAAATTGAGATATAGAAGGCATTCTAGGCAAACTAGTGCATCAACTAGTATTCAGTCCTATTGGCGCCGACATAGAGCACTCTTCGAGTATCAAAACCTTAAGAAAATGTCAATCATTTCACAAAGAGAAAATCATGCCATGGATAATCATGAACAGGAAGTTGTTTTGGAGAAATCAGTAGAAAATGAAAGTCCTTTGGTTGAAGAATTTTCAAATCCTTTCCAAGCCGAATCCCCAGATCCTTTCCCTGAAGAATCCCAAATTCCTTTCCAAGAAGAATCTTCAAATCCTTTGCAAGATTGTGAAAGCGTTGAAGCTACAAGGGGTTCCTCTATTCCTTTCCAAGACACTGAAAAGACGGAGGATCTTACTGCAGAAATAAAAAACTTAAAGATCATGTTGCAGGAAGAAAAACAAAGAGCAGATGAATATGAAAGGAAATATATAGAAGCTGAAGGATCAAGTGAAGAGTTACGAAAGAAATTAGCAGAGACTGAAAAGAGAGTATATCAGCTTCAGGACTCATTGAACAGGATGATATCTTCCATGTCAAGTCAAGTTGCGGACCTGAAGATGATCTTAAGTACTTCATCAAGATTGAGCTCAACTTTTCGACCTATTGCTAGAGTTGATGTCGCTTCCAGTAACTCTGATACTTCATCCACAGACTCTGATTTCACATTTCCAGCTACTGTTTCAAACCCAGAAGATGTTTCTTCTCCCCAGCCAAGCTCTTTTCAATTAATAGTTCAGGATATCTCTGCAGTGGAAGGATCAGGTTCTGAAAGTGAAAAAGAGGGTTCCTTTGATGATTTCTTCTAG 3294 0.3907 MGIPENIVVGSHVWVGDPELVWIDGQVLNINGDEADIQASNGKKVVSRLSKLHPKDTEAPTDGVDDMTKLAYLHEPGVLHNLEIRYKMNEIYTYTGNILIAINPFQSLPDLYDANMMKHYKGATLGDLSPHVFAIAEAAYRAMITDEKSNSILVSGESGAGKTETTKMLMCYLAYLGGRVASEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKYGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPRAFHYLNQSSCYELAGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVVAAILHIGNIKFAKSEETDSSVLEDEESKFHLQTTAELLMCDPNALEDALRKRVMITPEEIIMRSLDPIGSTVSRDGLAKTLYSRLFDWLVYKINVSIGQDPTSKFLIGVLDIYGFESFVSNSFEQFCINFTNEKLQQHFNQHVFKMEQEQYTKEGINWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLYQTFKDHKRFIKPKLARSDFTVVHYAGEVQYRSELFLDKNKDYVVPEHQDMLSGSRCSFVSGLFPPLSEETAKSAKFSSIGSRFKLQLQQLMETLNLTEPHYIRCVKPNNLLQPGIFENMNVIQQLRSGGVLEAVRIKCAGFPTHRTFHDFLTRVGILAPEVLLGNFNEKDSCKMILEKIGLSGYQIGETQIFLRAGQMAELDAQRARLLNNSATIIQKQIKTHFSRKTYVALWKSSVFIQSICRGELARRSYYHMKREAAAVRIQSYMRGKLARKKYTEIKIYVIILQTGCRAMVARDKLRYRRHSRQTSASTSIQSYWRRHRALFEYQNLKKMSIISQRENHAMDNHEQEVVLEKSVENESPLVEEFSNPFQAESPDPFPEESQIPFQEESSNPLQDCESVEATRGSSIPFQDTEKTEDLTAEIKNLKIMLQEEKQRADEYERKYIEAEGSSEELRKKLAETEKRVYQLQDSLNRMISSMSSQVADLKMILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTFPATVSNPEDVSSPQPSSFQLIVQDISAVEGSGSESEKEGSFDDFF* 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0709 1097 MobiDBLite consensus disorder prediction 1037 1068 - -
Lan8g0709 1097 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0709 1097 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0709 1097 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0709 1097 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0709 1097 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0709 1097 CDD MYSc_Myo11 76 720 IPR036018 -
Lan8g0709 1097 Coils Coil 944 999 - -
Lan8g0709 1097 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Lan8g0709 1097 Pfam Myosin N-terminal SH3-like domain 10 46 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan8g0709 1097 Pfam IQ calmodulin-binding motif 761 778 IPR000048 GO:0005515
Lan8g0709 1097 Pfam IQ calmodulin-binding motif 785 803 IPR000048 GO:0005515
Lan8g0709 1097 SMART iq_5 833 855 IPR000048 GO:0005515
Lan8g0709 1097 SMART iq_5 805 827 IPR000048 GO:0005515
Lan8g0709 1097 SMART iq_5 734 756 IPR000048 GO:0005515
Lan8g0709 1097 SMART iq_5 782 804 IPR000048 GO:0005515
Lan8g0709 1097 SMART iq_5 757 779 IPR000048 GO:0005515
Lan8g0709 1097 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan8g0709 1097 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 6 1035 - -
Lan8g0709 1097 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0709 1097 ProSiteProfiles IQ motif profile. 760 787 IPR000048 GO:0005515
Lan8g0709 1097 MobiDBLite consensus disorder prediction 896 921 - -
Lan8g0709 1097 ProSiteProfiles IQ motif profile. 783 810 IPR000048 GO:0005515
Lan8g0709 1097 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0709 1097 Gene3D - 734 784 - -
Lan8g0709 1097 Gene3D - 785 835 - -
Lan8g0709 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 785 IPR027417 -
Lan8g0709 1097 Gene3D - 439 623 - -
Lan8g0709 1097 ProSiteProfiles IQ motif profile. 834 861 IPR000048 GO:0005515
Lan8g0709 1097 Gene3D - 252 310 - -
Lan8g0709 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 786 862 IPR027417 -
Lan8g0709 1097 Gene3D Kinesin motor domain 65 662 IPR036961 -
Lan8g0709 1097 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g0709 1097 PANTHER MYOSIN 6 1035 - -
Lan8g0709 1097 SUPERFAMILY Tropomyosin 938 1014 - -
Lan8g0709 1097 Gene3D - 667 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0709 Lan-Chr8 9181860 9195859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0709 1 1003 Myosins gene family AT1G54560 63.471 0.0 1390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0709 K10357 - gmx:100803485 1795.02