Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0707 ATGAGAGAACAAAAGCAGTTATACATGTTTGAGAAACAGACATCTTCTGATGTTTCCAATTATGCATCAAGCAGTGGTTTGTCCGGTGACGATAAGGAGATCGGGTATGGAGTTGCAACATTCAAGCATGGATATCTTTCGGCCAAAAACTCTGTTTTTCATTTCTTACCCTTCAAAATTGACCTCAATTTTGCTCGCATGGTGATTGCAGAGATGATGGGTACTTTTATTTTGATGTTCTGTGTTTGTGGAATCATTGCAACCACACAACTCCAAAATGGTGCAGTGGGCCTTCTGGAGTATGCAGCCACAGCAGGATTAACAGTAGTTGTGATAATATTCTCCATTGGGCCAATATCTTGTGCTCATGTTAACCCAGCTGTCACAATAGCCTTTGCCACACTCGGTCATTTTCCATGGATCAAGGTTCCAATTTACATAATAGCTCAGACAATAGGTTCTGTGATTGCAACATATATTGGTAGCCTTGTCTATGGCATAAAATCAGAAGTTGTAATGACTAAGCCACTCCAAGGGTGCAACTCTGCATTCTGGGTTGAACTTATTGCAACCTTCATCATCATGTTCCTCATTGCAGCTTTGACATCTGAATCTCAATCAGTAGGTCATTTATCTGGCTTTGTTGCTGGAATGGCAATTGGTCTTGCTGTACTAATCACAGGGCCTGTGTCAGGTGGATCAATGAATCCAGCAAGATCATTAGGCCCAGCAATTCTCTCAAACAAATATAAGGATATATGGATATATATCATAGCCCCAAGTATTGGAGCTGTAGCAGGAGCTTTAATGTTTCGTTTTCTACGTCTTAGAGACCAAACTTGTAGCACTTTGTCCTCACCAAACATCAGTGATGTTGGTCATCCAATACCCTTTTGTGCAAGTTAG 906 0.4095 MREQKQLYMFEKQTSSDVSNYASSSGLSGDDKEIGYGVATFKHGYLSAKNSVFHFLPFKIDLNFARMVIAEMMGTFILMFCVCGIIATTQLQNGAVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATLGHFPWIKVPIYIIAQTIGSVIATYIGSLVYGIKSEVVMTKPLQGCNSAFWVELIATFIIMFLIAALTSESQSVGHLSGFVAGMAIGLAVLITGPVSGGSMNPARSLGPAILSNKYKDIWIYIIAPSIGAVAGALMFRFLRLRDQTCSTLSSPNISDVGHPIPFCAS* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0707 301 PANTHER AQUAPORIN NIP2-1 14 298 IPR034294 -
Lan8g0707 301 Gene3D Glycerol uptake facilitator protein. 47 284 IPR023271 -
Lan8g0707 301 PRINTS Major intrinsic protein family signature 66 85 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g0707 301 PRINTS Major intrinsic protein family signature 105 129 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g0707 301 PRINTS Major intrinsic protein family signature 142 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g0707 301 PRINTS Major intrinsic protein family signature 186 204 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g0707 301 PRINTS Major intrinsic protein family signature 217 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g0707 301 PRINTS Major intrinsic protein family signature 254 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g0707 301 PANTHER AQUAPORIN NIP7-1-RELATED 14 298 - -
Lan8g0707 301 SUPERFAMILY Aquaporin-like 62 279 IPR023271 -
Lan8g0707 301 ProSitePatterns MIP family signature. 123 131 IPR022357 -
Lan8g0707 301 Pfam Major intrinsic protein 63 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0707 Lan-Chr8 9160852 9176283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0707 66 286 Major Intrinsic Protein MIP AT5G37820 40.991 1.69e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0707 K09874 - mtr:MTR_1g070385 479.559