Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0705 ATGGAAGAGGTTGAAGTAGCTAACAGAGTAGCTGTTGAAAGCTGTCATAGAGTTCTTAGTATGTTGTCTGATCCCAAGGGTCAGAATCAGCAAAGGAATTTAATGGTGGAGACTGAGGGAGCAGTGGCAAGGTTCAAGAAAGTTGTGTCCTTGCTCCATAATGGTTTGGGTCATGCTAGAGTTAGGAAGCTTAAGAAACTTCAAGTCCCCTTTTCCCAAAGTATTCTCTTAGATAACCCAAATTGCCAAAGCAAAACCATCAACCATTCTAAAAATCTTCACTTTCCATATACCCAAACTAGCTTTCCTGAGAATTCAGTTCAGGAATTTGGCTCAAGTGTTGTTAGGAACACTCTCTCTCTTGGAAATCCATCTTTGGAATTGAGCTCCAGTGGGAAAACTCCTCTTCAGCTTGCACAACAAGCTTCGTCGGCTCACTATCACGTCCTTCAGCAGCAGCAACAGAAACAACAAAGGTTGATAGTGCAGCAGCAACAAATGAAACATCAAGCGGAAGTGTTGTACCGGAGGAACAATAACAGCGGCATAAACCTGAACTTTGACAGCACTAGCTGCACGCCAACAATGTCGTCTACCAGGTCTTTCATCTCTTCGTTGAGCATAGATGGAAGTGCAGCGAACTTGGATGGAAGCACCTTCCATTTAATTGGAGCTCCGCACTCTTCAGACCAGAATTCACAGCAGCATAAGAGAAAATGCTCTGCCAGAGGCGATGAGGGCAGCGTGAAATGTGGGAGCAGTTCTCGATGCCATTGCTCAAAGAAGAGGAAGCATAGAGTGAAGAGATCAATCAAGGTGCCTGCTATCAGCAACAAACTTGCAGATATCCCTCCCGATGACTATTCCTGGCGGAAGTATGGGCAGAAGCCTATCAAGGGCTCTCCTCACCCTAGGGGATACTATAAGTGCAGCAGCATGAGAGGCTGCCCTGCTAGGAAGCATGTTGAGAGGTGTTTGGAAGAGCCTACAATGCTGGTTGTTACCTATGAAGGCGAGCATAACCACCCGAAGCTACCAGCGCAATCGGCAAATGCGTGA 1059 0.4627 MEEVEVANRVAVESCHRVLSMLSDPKGQNQQRNLMVETEGAVARFKKVVSLLHNGLGHARVRKLKKLQVPFSQSILLDNPNCQSKTINHSKNLHFPYTQTSFPENSVQEFGSSVVRNTLSLGNPSLELSSSGKTPLQLAQQASSAHYHVLQQQQQKQQRLIVQQQQMKHQAEVLYRRNNNSGINLNFDSTSCTPTMSSTRSFISSLSIDGSAANLDGSTFHLIGAPHSSDQNSQQHKRKCSARGDEGSVKCGSSSRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLVVTYEGEHNHPKLPAQSANA* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0705 352 Pfam WRKY DNA -binding domain 286 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan8g0705 352 Pfam Plant zinc cluster domain 237 282 IPR018872 -
Lan8g0705 352 ProSiteProfiles WRKY domain profile. 279 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan8g0705 352 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 351 IPR044810 GO:0003700
Lan8g0705 352 SUPERFAMILY WRKY DNA-binding domain 282 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan8g0705 352 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 351 - -
Lan8g0705 352 Gene3D WRKY domain 270 346 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan8g0705 352 SMART WRKY_cls 284 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan8g0705 352 MobiDBLite consensus disorder prediction 226 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0705 Lan-Chr8 9152392 9155166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0705 1 349 WRKY Transcription Factor Family AT2G30590 55.065 7.27e-128 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan8g0705 WRKY 4.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0705 - - gmx:100170681 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0705 8 9152392 9155166 Lan20g0164 20 1065770 1068350 LSH
Lan8g0705 8 9152392 9155166 Lan4g1747 4 26126081 26128725 LSH