Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0680 ATGACTATGACAATCTCAATGTTAAAGTGCACACTAACACAACCCCTAATAAATGTTCCTCCTCATAATAGCCAAAAATTAAACATGAGGCAGATTCAGAAAGAGAAGGTAGTGTTAGTGATGGGAGCCACAGGCACAGGAAAATCAAGGCTCTCAATCGACCTAGCCACATATTTTCCCTCAGAAATCATCAATTCTGATAAAATTCAAGTCTATGAAGGACTTGACATAGTCACAAACAAAATCTCCAAAGAACAACAACGTGGGGTGCCACACCATTTACTAGGAACACACAAACCCAACACTGAATTCACTGCTACTGATTTTTGTGACATGTCATTAGCTTCCATTGAATCGATCACTAGTCGAAAACGTGTTCCAATCATCGTTGGTGGCTCGAACTCATATCTTGAGGCCTTGATTGATGATGACGACTATAGATTTCGATCAAGGTATGATTTATGTTGTCTATGGATGGATGTGTCAATACCTACTCTGCATTCGTATGTCGCGAAACGGGTTGATCAAATGTTTGAACATGGAATGGTTGATGAAGTTAGACCCTTTTTCAATCCCAATGGGGGATATTCAAGAGGGATTAGAAAAGCTATTGGTGTTCCTGAATTTGATGAGTTTTTTAGGAGGGAAGCATTTCTTGATGAAGAAACTAAGCAAAGGTTACTTGAAGAAGCAATAAATGAAATGAAGGCCAACACTTGCAAATTGGGTATGAAACAATTGGGGAGGATTCATAGGCTAAGAAATGTTAAGAGATGGAAGATTCATCGATTAGATGCCACATCTGTGTTCAGAAAGCATGGTCAAGAAGCAAATGAGGCATGGAAAAAGCTGGTGGCAGAGCCTAGTGCTATGATTGTTGCCAACTTTCTCTACAACTCAAACACTACTAGTAGTATTACTATAAATGCTTTTTCTGACCTTAGAATGTTACCTTCCCAGAGTGTTATTGCTGCGGCAACATGCTAG 987 0.3941 MTMTISMLKCTLTQPLINVPPHNSQKLNMRQIQKEKVVLVMGATGTGKSRLSIDLATYFPSEIINSDKIQVYEGLDIVTNKISKEQQRGVPHHLLGTHKPNTEFTATDFCDMSLASIESITSRKRVPIIVGGSNSYLEALIDDDDYRFRSRYDLCCLWMDVSIPTLHSYVAKRVDQMFEHGMVDEVRPFFNPNGGYSRGIRKAIGVPEFDEFFRREAFLDEETKQRLLEEAINEMKANTCKLGMKQLGRIHRLRNVKRWKIHRLDATSVFRKHGQEANEAWKKLVAEPSAMIVANFLYNSNTTSSITINAFSDLRMLPSQSVIAAATC* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0680 328 Gene3D - 34 297 IPR027417 -
Lan8g0680 328 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 163 261 - -
Lan8g0680 328 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 27 304 IPR039657 -
Lan8g0680 328 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 27 304 - -
Lan8g0680 328 Pfam IPP transferase 149 247 - -
Lan8g0680 328 Pfam IPP transferase 70 143 - -
Lan8g0680 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 145 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0680 Lan-Chr8 8976327 8977485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0680 150 325 C2H2 Transcription Factor Family AT2G27760 30.542 1.39e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0680 K10760 - gmx:100803964 462.611