Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0668 ATGACCCTTCTTTTGTTCTACCTTCTTATTCTCTTCACTCTCTTCTTTTCTTCATTCTCCTTAAACTCTACATGTCCTCTTAACTTCACCATCCTCACCACCCTCAGCGGTGGCGCCAGGCCTTCCTCCTTCACCTCCACCACCCGCTGCCAGTTCATCCGCCAAGCCTTCCGCCTTGTACAATCTGACTATCTCCGCCGCACCACCTTCTTCCTACCACCCCTCAACTCTTCAGAATCATGCTGGCAAAGTTTCCAATCATATACAAACTCTTTCAACTCCACTTTCAATATTCGATCTTCTTGTGGCTTTCAAACAAGTTATATATCTCATGGTTGCATTAACATAACCACTAAACAAGATTTTGAAGCCTTGGTTACAAAGTCTGTGCTTCAAGATGTTGATAGAAACTGTAACCAATCACTTGAGAATAATTCTCCTTGTGCACTTTGTACTACTAGTGTTTCAAGTTTACCAGCTTCTGGTCCTTCCATTGGGAACCTTTCTGATTGCACTGCTTATCCTTCTATTTATGTTGCTGCTTTCTCTAATCATTTTGGACCATCTGATTCTGGTACTGCTAAGTGTTTATTCTCCCTTGATTTTTCATCTCAGGGTTCCTCTGGTGGTAAGAAAAAAGTTGTTATTGTTCTTGTTTCGGTTCTTGTTTTCTTTGTTTTGTTTCTTTTAGTTGTTGGGTTTTTTGGGTATTGGAAATTGAGAAGGAAGAGTAAGGGTGGAAATATTGCAGAGGTGGATTTGGTTTCTGGGTTGGATTCAATGGATCAAAGTACTACTTTGATTAGGTTTACTATTGATGATGTTAAGAAGGCAACTAAGAATTTTCATAGGGATAGTATAATTGGAAGAGGGGGTTATGGTAATGTGTATAGAGGGGTTATTTCTGATGGGAGTGAGGTTGCATTGAAGAGGTTCAAGAATTGTTCTGCTTCTGGTGATGCAAGTTTCACTCATGAAGTTGAGGTCATTGCGAGTATTAGGCATGTGAACCTTGTCGCGTTGAGAGGTTATTGTTCTGCAACAACTAAATATGAAGGTTACCAAAGGATTATTGTTACTGATTTGATGAAAAATGGGAGCCTTCATGATCATTTGTTTGGTTCTATAGGGATCAAACTCAGTTGGCCGATTCGTCAAAAGATTGCGCTAGGTACCGCGAGGGGATTGGCTTATTTACATTATGGTGCCCAACCTTCCATTATCCATAGGGATATTAAGGCTAATAATATACTTTTGGATGATAAGTTTGAAGCTAAGGTTGCAGATTTTGGATTGGCGAAGTTCAATCCCGAAGGAATGACTCATATGAGTACAAGGGTAGCCGGAACAATGGGATATGTTGCTCCTGAGTATGCTTTATATGGGAAATTGACAGAAAGAAGTGATGTTTTTAGTTATGGTGTTGTGCTTCTTGAGCTTTTGAGTGGAAGGAAGGCTCTTCGAACCGACAATGATGGCCAACCTTCAGCCTTGACTGATTGGGCTTGGTCATTGGTTAGAACAGGTAGAGCTTTGGATGTGATGGAAGATGGCATGGCAGAACCTGGTTCAGAACAAGTTCTTGAGAAGTATGTGTTAATTGCAGTACTTTGCTCTCATCCACAGTTATATGCTAGGCCAACAATGGATCAGGTTGTTAAAATGATGGAAACAGATGATGAATCCGTGCCTTCGATACCGGAACGGCCGATCCCTTTTGTTGCTGGGAGGCTTGATATTGAGAGAACTGTGAGCACAAGTGCCTCTGGCCAGCTCTGTAGTCCAACCGGATATCAAACATATACATTGGAAAGTGACCCCATTCTTCAAATTCTAAGGAAGAAAGGAGGCTCAAGCCCCAGGATTTTGAGTACAGATTGA 1881 0.4136 MTLLLFYLLILFTLFFSSFSLNSTCPLNFTILTTLSGGARPSSFTSTTRCQFIRQAFRLVQSDYLRRTTFFLPPLNSSESCWQSFQSYTNSFNSTFNIRSSCGFQTSYISHGCINITTKQDFEALVTKSVLQDVDRNCNQSLENNSPCALCTTSVSSLPASGPSIGNLSDCTAYPSIYVAAFSNHFGPSDSGTAKCLFSLDFSSQGSSGGKKKVVIVLVSVLVFFVLFLLVVGFFGYWKLRRKSKGGNIAEVDLVSGLDSMDQSTTLIRFTIDDVKKATKNFHRDSIIGRGGYGNVYRGVISDGSEVALKRFKNCSASGDASFTHEVEVIASIRHVNLVALRGYCSATTKYEGYQRIIVTDLMKNGSLHDHLFGSIGIKLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKANNILLDDKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGKLTERSDVFSYGVVLLELLSGRKALRTDNDGQPSALTDWAWSLVRTGRALDVMEDGMAEPGSEQVLEKYVLIAVLCSHPQLYARPTMDQVVKMMETDDESVPSIPERPIPFVAGRLDIERTVSTSASGQLCSPTGYQTYTLESDPILQILRKKGGSSPRILSTD* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0668 626 SUPERFAMILY Protein kinase-like (PK-like) 264 573 IPR011009 -
Lan8g0668 626 Pfam Protein kinase domain 282 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0668 626 ProSiteProfiles Protein kinase domain profile. 282 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0668 626 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Lan8g0668 626 Gene3D Transferase(Phosphotransferase) domain 1 363 565 - -
Lan8g0668 626 CDD STKc_IRAK 288 557 - -
Lan8g0668 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Lan8g0668 626 Gene3D Phosphorylase Kinase; domain 1 251 361 - -
Lan8g0668 626 PANTHER OS01G0253100 PROTEIN 15 611 IPR045271 GO:0004714|GO:0006468
Lan8g0668 626 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 15 611 - -
Lan8g0668 626 Pfam SPARK 22 159 IPR043891 -
Lan8g0668 626 SMART serkin_6 282 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0668 Lan-Chr8 8867953 8869897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0668 4 606 Receptor kinase-like Gene Family AT2G48010 61.501 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Lan8g0668 Pkinase 2.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0668 - - gmx:100800760 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0668 8 8867953 8869897 Lan20g0208 20 1396688 1398817 LSH
Lan8g0668 8 8867953 8869897 Lan4g1686 4 25634466 25636535 LSH