Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0667 ATGAAAGAAAAAGTAGAATCTCCTGTGACAGTTCTTGAGGACTATTTTAGGAGTTCAGATTCAGAAACAAGTTCTTCTAAGGATCCTACAGTGGATGAATCTGAAGACATTGCAAAACCTGCTTCTAAGTGGCATAAATTTTTTCATTTGTTGAGAAGTTCAAGGAAACCTGTAACCATGTTGCATCCTCTGAAGCTCTCAAAAAGAATGAGCAGAAGCATGAGAGGGAGAACATTGCATGGTTGTCTCTTTGGTGCAACTTTATCATCCCCTTCAAGGTCACAATGGAAGATCTTCACAAATCATGATATACTGCTTGCAACCAATCATTTCAGCCAAGAAAATTTGATTGGAAAGGGTGGTTATGCTGAAGTTTACAAAGGGTGTTTACCAAATAATCAGCTAGTAGCAATTAAAAGGTTAACAAGAGGAACAGTTGATGAAATCATAGGTGATTTCTTATCAGAACTTGGTGTAATGGCACATGTTAATCATCCTAATATTGCTAAGCTAGTTGGTTATGGTGTGGATGATGGAATGCATCTAGTTCTTGAATTATCTGAAAAAGGAAGTTTGGCTTCAGTGCTTTATGGTTCCAAGGAGAAATTACCATGGTTTATTAGGGGGAAAATTGCATTAGGAACAGCTAAGGGTATATTATATCTTCATGAGGGTTGTCAAAGAAGAATAATCCACAGAGATATTAAAGCTGCAAATATATTGCTCACAGAAGACTATGAGCCTCAGATTTGTGATTTTGGGCTAGCAAAATGGCTGCCAGAGAATTGGACTCACCACACAGTTGCAAAATTTGAAGGAACTTTTGGTTACCTTGCACCTGAATTCTTACTTCATGGAATAGTAGATGAGAAAACAGATGTATTTGCCTTTGGTGTATTACTATTAGAATTAGTGAGTGGAAGAAGAGCACTTGATTATTCAAAACAAAGTCTTGTTTTGTGGGCAAAACCATTGTTGGAAAAGAATGATATTAAGGAGCTGATTGATCCTTCACTAGAAGATGAATTTGACTCAAGACAAATGAATCTTATGCTCCTGGCTGCTTCTTTATGTATACAAAAATCATCAATTCGTCGACCCTCTATGAGACAGGTTGTGGAGCTTTTGAATGGAAACCTTAGCTGCTTTAAGGGTATGAAGAAAACTAGACTACCATTTTTCCGAAAAGTTTTTAAGGAAGAACTCGTTGATTATGAATAG 1221 0.3677 MKEKVESPVTVLEDYFRSSDSETSSSKDPTVDESEDIAKPASKWHKFFHLLRSSRKPVTMLHPLKLSKRMSRSMRGRTLHGCLFGATLSSPSRSQWKIFTNHDILLATNHFSQENLIGKGGYAEVYKGCLPNNQLVAIKRLTRGTVDEIIGDFLSELGVMAHVNHPNIAKLVGYGVDDGMHLVLELSEKGSLASVLYGSKEKLPWFIRGKIALGTAKGILYLHEGCQRRIIHRDIKAANILLTEDYEPQICDFGLAKWLPENWTHHTVAKFEGTFGYLAPEFLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSKQSLVLWAKPLLEKNDIKELIDPSLEDEFDSRQMNLMLLAASLCIQKSSIRRPSMRQVVELLNGNLSCFKGMKKTRLPFFRKVFKEELVDYE* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0667 406 SMART serkin_6 111 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0667 406 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 404 - -
Lan8g0667 406 Gene3D Transferase(Phosphotransferase) domain 1 188 389 - -
Lan8g0667 406 PANTHER OS08G0249100 PROTEIN 1 404 - -
Lan8g0667 406 ProSitePatterns Protein kinases ATP-binding region signature. 117 139 IPR017441 GO:0005524
Lan8g0667 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Lan8g0667 406 Gene3D Phosphorylase Kinase; domain 1 87 185 - -
Lan8g0667 406 MobiDBLite consensus disorder prediction 1 36 - -
Lan8g0667 406 SUPERFAMILY Protein kinase-like (PK-like) 89 376 IPR011009 -
Lan8g0667 406 ProSiteProfiles Protein kinase domain profile. 111 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0667 406 Pfam Protein kinase domain 112 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0667 Lan-Chr8 8856710 8860355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0667 97 379 Receptor kinase-like Gene Family AT1G60800 41.781 6.99e-65 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan8g0667 Pkinase 7.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0667 - - lang:109353423 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0667 8 8856710 8860355 Lan20g0209 20 1401995 1404921 LSH