Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan8g0667 | ATGAAAGAAAAAGTAGAATCTCCTGTGACAGTTCTTGAGGACTATTTTAGGAGTTCAGATTCAGAAACAAGTTCTTCTAAGGATCCTACAGTGGATGAATCTGAAGACATTGCAAAACCTGCTTCTAAGTGGCATAAATTTTTTCATTTGTTGAGAAGTTCAAGGAAACCTGTAACCATGTTGCATCCTCTGAAGCTCTCAAAAAGAATGAGCAGAAGCATGAGAGGGAGAACATTGCATGGTTGTCTCTTTGGTGCAACTTTATCATCCCCTTCAAGGTCACAATGGAAGATCTTCACAAATCATGATATACTGCTTGCAACCAATCATTTCAGCCAAGAAAATTTGATTGGAAAGGGTGGTTATGCTGAAGTTTACAAAGGGTGTTTACCAAATAATCAGCTAGTAGCAATTAAAAGGTTAACAAGAGGAACAGTTGATGAAATCATAGGTGATTTCTTATCAGAACTTGGTGTAATGGCACATGTTAATCATCCTAATATTGCTAAGCTAGTTGGTTATGGTGTGGATGATGGAATGCATCTAGTTCTTGAATTATCTGAAAAAGGAAGTTTGGCTTCAGTGCTTTATGGTTCCAAGGAGAAATTACCATGGTTTATTAGGGGGAAAATTGCATTAGGAACAGCTAAGGGTATATTATATCTTCATGAGGGTTGTCAAAGAAGAATAATCCACAGAGATATTAAAGCTGCAAATATATTGCTCACAGAAGACTATGAGCCTCAGATTTGTGATTTTGGGCTAGCAAAATGGCTGCCAGAGAATTGGACTCACCACACAGTTGCAAAATTTGAAGGAACTTTTGGTTACCTTGCACCTGAATTCTTACTTCATGGAATAGTAGATGAGAAAACAGATGTATTTGCCTTTGGTGTATTACTATTAGAATTAGTGAGTGGAAGAAGAGCACTTGATTATTCAAAACAAAGTCTTGTTTTGTGGGCAAAACCATTGTTGGAAAAGAATGATATTAAGGAGCTGATTGATCCTTCACTAGAAGATGAATTTGACTCAAGACAAATGAATCTTATGCTCCTGGCTGCTTCTTTATGTATACAAAAATCATCAATTCGTCGACCCTCTATGAGACAGGTTGTGGAGCTTTTGAATGGAAACCTTAGCTGCTTTAAGGGTATGAAGAAAACTAGACTACCATTTTTCCGAAAAGTTTTTAAGGAAGAACTCGTTGATTATGAATAG | 1221 | 0.3677 | MKEKVESPVTVLEDYFRSSDSETSSSKDPTVDESEDIAKPASKWHKFFHLLRSSRKPVTMLHPLKLSKRMSRSMRGRTLHGCLFGATLSSPSRSQWKIFTNHDILLATNHFSQENLIGKGGYAEVYKGCLPNNQLVAIKRLTRGTVDEIIGDFLSELGVMAHVNHPNIAKLVGYGVDDGMHLVLELSEKGSLASVLYGSKEKLPWFIRGKIALGTAKGILYLHEGCQRRIIHRDIKAANILLTEDYEPQICDFGLAKWLPENWTHHTVAKFEGTFGYLAPEFLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSKQSLVLWAKPLLEKNDIKELIDPSLEDEFDSRQMNLMLLAASLCIQKSSIRRPSMRQVVELLNGNLSCFKGMKKTRLPFFRKVFKEELVDYE* | 407 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan8g0667 | 406 | SMART | serkin_6 | 111 | 383 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan8g0667 | 406 | PANTHER | PROTEIN KINASE FAMILY PROTEIN | 1 | 404 | - | - | |
Lan8g0667 | 406 | Gene3D | Transferase(Phosphotransferase) domain 1 | 188 | 389 | - | - | |
Lan8g0667 | 406 | PANTHER | OS08G0249100 PROTEIN | 1 | 404 | - | - | |
Lan8g0667 | 406 | ProSitePatterns | Protein kinases ATP-binding region signature. | 117 | 139 | IPR017441 | GO:0005524 | |
Lan8g0667 | 406 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 230 | 242 | IPR008271 | GO:0004672|GO:0006468 | |
Lan8g0667 | 406 | Gene3D | Phosphorylase Kinase; domain 1 | 87 | 185 | - | - | |
Lan8g0667 | 406 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Lan8g0667 | 406 | SUPERFAMILY | Protein kinase-like (PK-like) | 89 | 376 | IPR011009 | - | |
Lan8g0667 | 406 | ProSiteProfiles | Protein kinase domain profile. | 111 | 394 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan8g0667 | 406 | Pfam | Protein kinase domain | 112 | 373 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan8g0667 | Lan-Chr8 | 8856710 | 8860355 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan8g0667 | 97 | 379 | Receptor kinase-like Gene Family | AT1G60800 | 41.781 | 6.99e-65 | 215 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VI | Lan8g0667 | Pkinase | 7.6e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan8g0667 | - | - | lang:109353423 | 814.298 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan8g0667 | 8 | 8856710 | 8860355 | Lan20g0209 | 20 | 1401995 | 1404921 | LSH |