Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0651 ATGAAGTTTTGCAAGACTTATCAGGAATATATGGAAGGACAGCATCATAACCTTCCTGGGGTTGGATTCAAAAAGCTTAAGAAGATAATGAAGACTTGTAGGAGAGACTGCCAATCTCATAATTCTCTTAATGCCATCAATTCCTGCCATGATCAATGCCCAGTATGCGACGGGACATTCTTCCCTTCTCTTCTCAACGAAATGTCGGATGTATTAGGCTGCTTTAATCACCGTGCGCAAAAATTGCTGGACATACATCTTGCTTCTGGCTTCAGAAAGTATCTTTTCTGGTTGAAAGGAAAATTACATGGAGATCATACTGTTCTAGTTCAAGAAGGCAGAGATTTAGTCACTTATGCGCTGATAAATGCCATCGCAATTCGAAAAATACTAAAGAAATATGATAAGATTCATTATTCCAAGCAAGGGCAATTATTCAAGTCACAAGTACAAACTATGCACAAGGAAATACTTCAAAGTCCATGGCTTATTGAGCTTATGGCCTTGTACCTCAACTTAAGGAGAACTAATTCGGAGTCAATGAAGGCGCCTACTTTGTTTGATGGATGTTCCCTCACATTTAAAGATGGAAAGCCATCACTTACTTGTGAGCTCTTCGATTCCATCAAAATCGATATAGACCTGACTTGTTCCGTATGCTTGGATACAGTTTTCGATCCAGTTTCTCTGACCTGCGGACATATATTCTGCTACAGTTGTGCTTGCTTAGCTGCATCGACAAGTATTGTTGATGGACTTAAGGCTGCAGATCCTAAAGAGAAATGTCCTCTATGCCGAGAGGAAGGAGTTTATGAAGGTGCTGTGCGCTTGGAAGAGTTAAATATTCTGTTAGCCCGAAACTGCCATGAGTACTGGGAGCAGCGTCTTCGGACCGAGAGGGTAGAGAGGATCAAGCAAGCTAAGGAACACTGGGAATCACAATGTAGGGCATTCATGGGTGTCTAA 966 0.4151 MKFCKTYQEYMEGQHHNLPGVGFKKLKKIMKTCRRDCQSHNSLNAINSCHDQCPVCDGTFFPSLLNEMSDVLGCFNHRAQKLLDIHLASGFRKYLFWLKGKLHGDHTVLVQEGRDLVTYALINAIAIRKILKKYDKIHYSKQGQLFKSQVQTMHKEILQSPWLIELMALYLNLRRTNSESMKAPTLFDGCSLTFKDGKPSLTCELFDSIKIDIDLTCSVCLDTVFDPVSLTCGHIFCYSCACLAASTSIVDGLKAADPKEKCPLCREEGVYEGAVRLEELNILLARNCHEYWEQRLRTERVERIKQAKEHWESQCRAFMGV* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0651 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 204 319 IPR013083 -
Lan8g0651 321 Pfam Zinc finger, C3HC4 type (RING finger) 214 268 - -
Lan8g0651 321 ProSitePatterns Zinc finger RING-type signature. 232 241 IPR017907 -
Lan8g0651 321 ProSiteProfiles SPX domain profile. 1 148 IPR004331 -
Lan8g0651 321 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 321 - -
Lan8g0651 321 SMART ring_2 217 265 IPR001841 -
Lan8g0651 321 CDD SPX_BAH1-like 2 144 - -
Lan8g0651 321 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 321 IPR033326 -
Lan8g0651 321 ProSiteProfiles Zinc finger RING-type profile. 217 266 IPR001841 -
Lan8g0651 321 SUPERFAMILY RING/U-box 210 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0651 Lan-Chr8 8731725 8734811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0651 214 268 C3H Transcription Factor Family AT4G28270 38.333 3.62e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0651 K16275 - gmx:100797432 546.199