Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0629 ATGGCGATGGCGCGGAATAACAACGTCAGCAACGGCACCGGAGTGCACCACCATAATACGGCGGCGCAATCACGCCAACAATGGAAAAAGCTACAAGTGTTCAATGAAGTTCTCCGCCGTCTCAAAGATTCCGGTGATGATGAAGCTATGCAACCTTACTTCGACGATCAGCTATGGGCTCACTTCAATCGCCTCCCGACACGGTATGCGTTGGATGTGAATGTGGAAAGGGCTGCAGATGTACTTATGCACAAGAGATTACTACATTTGGCATGTGATCCTGATAACAGACCTGCAATTGAAGTTCGATTAGTTCAGGTTCATCCCATATCTGATGGAAACTCAAATGACTCCGTCCTATCAGACGATCCTGGAAAAGAATCTGATCAAAGCTCTTCAAATTTCTCAAGAAGACAGGGTTTACATCCACCTCCTGCTTTTGGTTCTTCTCCCAATCTTGAAGCACTAACACTTGAAGCAAATAATTCTGAAGACATGGAGGAGGAACAATCTGTGCATGCTAGTGCACAATATTCACGGCCCATGCATGAAATTACCTTCTCAACAGATGACAAGCCAAAGCGTCTTAGTCAGTTAACTGCTTTGCTTGCTGAAATTGGGCTGAACATCCAAGAGGCGCATGCCTTCTCCACAACAGACGGTTACTCATTAGATGTGTTTGTTGTTGAAGGATGGCCCTATGAGGAAACAGAGAAGCTTAAAGCAACATTGGGAAAAGAAGTCTCAATGATTGAGTGGCAGGCAAGGTCTAGTCAGGAATCAGAATCTTCTGTTGTGAAGCCTGATCAAGATAAGGTGAAATGTGAACCTGATCAGTTGACAATACCTAGTGATGGAATGGATGTTTGGGAAATAGATCCTAAGCATTTGAAATATGGAACACATATTGCGTCCGGGTCATATGGTGAATTATTTAGAGGTATATATTGTAGTCAAGAAGTAGCCATTAAAGTTCTCAAGGCTGACCCTGAGCATATAAATTCAGATTTGCAAAGAGAGTTTGCGCAGGAAGTCTATATCATGAGAAAGGTTCGTCACAAGAATGTTGTACAATTCATAGGAGCATGTACAAAGCTCCCACACTTATGCATAGTTACAGAATTTATGTCCGGTGGAAGTGTGTATGACTACCTACATAAACAGAAGGGTTGCTTTAAATTCCCTACCCTGCTCAAAGTTGCTATTGATGTTTCTAAAGGAATGAACTACTTGCACCAACATGACATAATCCATAGAGACTTGAAGGGTGCCAATCTTTTGATGGATGAAAATGGTGTTGTAAAGGTTGCTGATTTTGGGGTAGCTAGAGTGAAAGCTCAATCTGGAGTTATGACAGCAGAAACTGGAACATATCGATGGATGGCTCCTGAGGTTATAGAACACAAGTCGTATGATCACAAAGCTGATGTATTTAGTTTTGGAGTTGTCTTATGGGAATTGCTAACTGGAAAGCTTCCGTATGAATACCTGACCCCTCTACAAGCTGCTATAGGAGTAGTTCAAAAGGGTCTACGACCAACCATCCCTAAGAACACTCATCCAAAGTTTTTTGAGCTTCTTGAGAGATCTTGGCAGCAAGATCCAGCATTGAGACCTGATTTCTCTGAGATTATCGAGATACTGCAGGAGTTGGCCAAGGAGTTTGTGTGCATGTATGACAGGTCGAAGATGAAGGAAAGGAGCAGCACAGAGATAAATCAGGAGGAGGATTTCTATCTATCCTCAGACGAGGTCATCACTAAGAAGTTAAAGTTTAACTGA 1782 0.4259 MAMARNNNVSNGTGVHHHNTAAQSRQQWKKLQVFNEVLRRLKDSGDDEAMQPYFDDQLWAHFNRLPTRYALDVNVERAADVLMHKRLLHLACDPDNRPAIEVRLVQVHPISDGNSNDSVLSDDPGKESDQSSSNFSRRQGLHPPPAFGSSPNLEALTLEANNSEDMEEEQSVHASAQYSRPMHEITFSTDDKPKRLSQLTALLAEIGLNIQEAHAFSTTDGYSLDVFVVEGWPYEETEKLKATLGKEVSMIEWQARSSQESESSVVKPDQDKVKCEPDQLTIPSDGMDVWEIDPKHLKYGTHIASGSYGELFRGIYCSQEVAIKVLKADPEHINSDLQREFAQEVYIMRKVRHKNVVQFIGACTKLPHLCIVTEFMSGGSVYDYLHKQKGCFKFPTLLKVAIDVSKGMNYLHQHDIIHRDLKGANLLMDENGVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKSYDHKADVFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFFELLERSWQQDPALRPDFSEIIEILQELAKEFVCMYDRSKMKERSSTEINQEEDFYLSSDEVITKKLKFN* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0629 593 Gene3D Phosphorylase Kinase; domain 1 286 377 - -
Lan8g0629 593 Pfam Protein tyrosine and serine/threonine kinase 297 548 IPR001245 GO:0004672|GO:0006468
Lan8g0629 593 CDD STKc_MAP3K-like 303 548 - -
Lan8g0629 593 SUPERFAMILY Protein kinase-like (PK-like) 280 548 IPR011009 -
Lan8g0629 593 PIRSF TyrPK_CSF1-R 62 186 - -
Lan8g0629 593 PIRSF TyrPK_CSF1-R 276 397 - -
Lan8g0629 593 PIRSF TyrPK_CSF1-R 391 590 - -
Lan8g0629 593 ProSiteProfiles ACT domain profile. 184 259 IPR002912 -
Lan8g0629 593 PRINTS Tyrosine kinase catalytic domain signature 373 386 IPR001245 GO:0004672|GO:0006468
Lan8g0629 593 PRINTS Tyrosine kinase catalytic domain signature 410 428 IPR001245 GO:0004672|GO:0006468
Lan8g0629 593 PRINTS Tyrosine kinase catalytic domain signature 456 466 IPR001245 GO:0004672|GO:0006468
Lan8g0629 593 PRINTS Tyrosine kinase catalytic domain signature 475 497 IPR001245 GO:0004672|GO:0006468
Lan8g0629 593 PRINTS Tyrosine kinase catalytic domain signature 519 541 IPR001245 GO:0004672|GO:0006468
Lan8g0629 593 MobiDBLite consensus disorder prediction 111 139 - -
Lan8g0629 593 MobiDBLite consensus disorder prediction 111 152 - -
Lan8g0629 593 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 15 557 - -
Lan8g0629 593 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 557 - -
Lan8g0629 593 Gene3D Transferase(Phosphotransferase) domain 1 378 591 - -
Lan8g0629 593 SMART serkin_6 297 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0629 593 MobiDBLite consensus disorder prediction 1 26 - -
Lan8g0629 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Lan8g0629 593 ProSiteProfiles Protein kinase domain profile. 297 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0629 593 Coils Coil 593 593 - -
Lan8g0629 593 SUPERFAMILY ACT-like 182 254 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0629 Lan-Chr8 8554645 8561503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0629 1 554 MAP Kinase Kinase Kinase AT4G35780 64.144 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan8g0629 PK_Tyr_Ser-Thr 6.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0629 - - gmx:100805180 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0629 8 8554645 8561503 Lan20g0255 20 1739936 1747225 LSH
Lan8g0629 8 8554645 8561503 Lan4g1630 4 25201960 25208998 LSH