Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0628 ATGGATGAGTTGAGATCGAAGATTAAAGTAGATAATGATGCTGCACAAGAACACAAGTCCAAACATAACCATGTAGATGAAAAAGATGATTTTTTTAAGCAGAAAGTTGGTAGAAAAAGAAAAACTTTCAACAAAGATGAAGAAGTTAGTGATGGTGAATCTCAAATGCCTTCACAAAGCACCACTCAGAGACGTAGTTTAAGAAATGCTCATAGACCCAGTAATAAAAATGAGATACCAAAAGTGAAGAGAACTGTTAAATTTACTGAAGAAGAGTGCTTAATGTGCCATCAATGTCAGAGAAATGATAAAGGAGAGGTTGTGAGGTGCAGAAGTTGTAAGCGCAAAAGATATTGTTTGTTCTGTTTAAAAAATTGGTATCCTGAATGGAAAAATGATGATGTTGCCGAGGCATGCCCCGTGTGCCGCGGTAATTGCAATTGCAAAGCATGCTTGCGGTCTGATGAACTTATTAAGAAAATGAAGAAAGAGGTGGAAGAGAAGAGGTATGGAGGTAATGAAGTTGAGCTCTCTAAGTATATGCTGATACGGATTCTTCCATATGTAAGACAGTTGAATGAAGAACAGATGATTGAGTTGGGGATAGAAGCTAAGAGACAAGGACTCTCACTCTCAGAGCTAAATATTGAAAAGGCAGAATACTCACAAATGGAGCGTGTCTACTGTGACAACTGCAAAACATCAATATTTGATTACCACAGAAGTTGTAGAAAATGCTCTTTCGACCTTTGTCTTACTTGTTGCCACGAGCTTCGTGATGGTCAGCTTCTAGGTGGTGCGGATCCAGTTGAATTGGAGTTTATTAAATGTAGTCCTGAGTATTTGCATGGTGTAAAAGAAAAGAAAAAGGAGTCTGAGATACATGAATTACCTGCTGATGCTGAGCCGAAAAATCGTGGATGGTCAAGATCTGAGTGGCGTGCAGAAAGTGATGGTAGCATTCCCTGTCCAAAGGTCAATGATGAATGCTGCCATAGTTTTCTTGAATTGAAAAGCATATTCGGTCAGGCTTTTATTTCAGAGTTAGTCTATAAGGCAGAAGAACTAGCAAAAGCATATAAGCTTGAAGATACAATTGAGACTCCTGGATTCTTACTTAAGAAGAATCAAATATGTACCACTTGA 1146 0.3831 MDELRSKIKVDNDAAQEHKSKHNHVDEKDDFFKQKVGRKRKTFNKDEEVSDGESQMPSQSTTQRRSLRNAHRPSNKNEIPKVKRTVKFTEEECLMCHQCQRNDKGEVVRCRSCKRKRYCLFCLKNWYPEWKNDDVAEACPVCRGNCNCKACLRSDELIKKMKKEVEEKRYGGNEVELSKYMLIRILPYVRQLNEEQMIELGIEAKRQGLSLSELNIEKAEYSQMERVYCDNCKTSIFDYHRSCRKCSFDLCLTCCHELRDGQLLGGADPVELEFIKCSPEYLHGVKEKKKESEIHELPADAEPKNRGWSRSEWRAESDGSIPCPKVNDECCHSFLELKSIFGQAFISELVYKAEELAKAYKLEDTIETPGFLLKKNQICTT* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0628 381 ProSiteProfiles Zinc finger RING-type profile. 93 143 IPR001841 -
Lan8g0628 381 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 90 164 IPR018866 -
Lan8g0628 381 MobiDBLite consensus disorder prediction 1 52 - -
Lan8g0628 381 Coils Coil 1 21 - -
Lan8g0628 381 MobiDBLite consensus disorder prediction 53 68 - -
Lan8g0628 381 MobiDBLite consensus disorder prediction 1 81 - -
Lan8g0628 381 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 22 369 IPR045109 GO:0032454|GO:0033169
Lan8g0628 381 PANTHER - 22 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0628 Lan-Chr8 8544998 8547419 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0628 K15601 - gmx:112997634 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0628 8 8544998 8547419 Lan20g0256 20 1751642 1758536 LSH
Lan8g0628 8 8544998 8547419 Lan4g1628 4 25161926 25183842 LSH