Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0627 ATGGATGAGTTGAGATCGAAGATTAAAGTAGATAATGATGCTGCACAAGAACACAAGTCCAAACATAACCATGTAGATGAAAAAGATGATTTTTTTAAGCAGAAAGTTGGTAGAAAAAGAAAAACTTTCAACAAAGATGAAGAAGTTAGTGATGGTGAATCTCAAATGCCTTCACAAAGCACCACTCAGAGACGTAGTTTAAGAAATGCTCATAGACCCAGTAATAAAAATGAGATACCAAAAGTGAAGAGAACTGTTAAATTTACTGAAGAAGAGTGCTTAATGTGCCATCAATGTCAGAGAAATGATAAAGGAGAGGTTGTGAGGTGCAGAAGTTGTAAGCGCAAAAGATATTGTTTGTTCTGTTTAAAAAATTGGTATCCTGAATGGAAAAATGATGATGTTGCCGAGGCATGCCCCGTGTGCCGCGGTAATTGCAATTGCAAAGCATGCTTGCGGTCTGATGAACTTATTAAGAAAATGAAGAAAGAGGTGGAAGAGAAGAGGTATGGAGGTAATGAAGTTGAGCTCTCTAAGTATATGCTGATACGGATTCTTCCATATGTAAGACAGTTGAATGAAGAACAGATGATTGAGTTGGGGATAGAAGCTAAGAGACAAGGACTCTCACTCTCAGAGCTAAATATTGAAAAGGCAGAATACTCACAAATGGAGCGTGTCTACTGTGACAACTGCAAAACATCAATATTTGATTACCACAGAAGTTGTAGAAAATGCTCTTTCGACCTTTGTCTTACTTGTTGCCACGAGCTTCGTGATGGTCAGCTTCTAGGTGGTGCGGATCCAGTTGAATTGGAGTTTATTAAATGTAGTCCTGAGTATTTGCATGGTGTAAAAGAAAAGAAAAAGGAGTCTGAGATACATGAATTACCTGCTGATGCTGAGCCGAAAAATCGTGGATGGTCAAGATCTGAGTGGCGTGCAGAAAGTGATGGTAGCATTCCCTGTCCAAAGGTCAATGATGAATGCTGCCATAGTTTTCTTGAATTGAAAAGCATATTCGGTCAGGCTTTTATTTCAGAGTTAGTCTATAAGGCAGAAGAACTAGCAAAAGCATATAAGCTTGAAGATACAATTGAGACTCCTGACAATTGGTGTTCTTGTCCGAAGATCAGTAGAAACCCAGATGTTAGAAATAATATGCGGAAGGCGGCTTCTCGTGAAGATTCCAGTGACAACTGGTTATACTGTCCCATTGCTGAAGATTCACGATCGTTCGATTTAAAGCACTTTCAATGGCATTGGAACAAAGGGGAGCCTGTTATTGTCAGCAATGTGCTTGAATGTACATCTGGTTTAAGCTGGGAACCACTAGTGATGTGGCGTGCTTTTCGTCAGATAACTAATACCAAGCATGGTCAACATTTGGATGTGAAGGTCATAGATTGCTTAGATTGGTGTGAGGGAGAGATCAATATCCATCAATTCTTTACCGGCTATACAAATGGTCGTTATGATTGGCTTAATTGGCCTCAAATACTGAAATTGAAAGATTGGCCTCCTTCAAATTTATTTGAGGAACGCTTACCTCGTCATTGTGCCGAGTTCATATCTTCCTTGCCCTATAAAGAATATACAGATCCTCTCAAAGGTGCTCTTAACCTCGCTGTGAAGTTGCCTCGTAAATGTTTGAAGCCAGATATGGGACCAAAGACATATGTTGCTTATGGAGTTGCTCAGGAGCTTGGACGTGGCAATTCTGTGACTAAGCTTCACTGTGATATGTCTGATGCAGTAAATGTATTGACTCATATTTCCAAAGTCGAATTGGAGCATAAAAACCTCGTCGCCATTGATAAGTTGAAGCTAAAGCACCTTGAGCAAGACAAGAGGGAACTAATTCGAGATGATCAGGAGGGAGAAACTAACATCGGCGTGCTTAGTAATTCATCCTCTACAGTAGATGGTCTTTCATATGGGCCAGAGTTGAAGGATGTTGAGAATGTCAAAATGAATCAAGAAAACAGTATGTCAATTGCGGAGGATGCTTCAGATGGTGCTCTCTGGGATATTTTTCGGAGACAGGATGTACCAAAATTGCAGGAATATCTGAAGAAGCATTTTCGAGAGTTTAGGCATGTCCATTGTCGTCCATTAAACCAGGTTATTCACCCCATCCATGACCAGACCATGTATCTGACCTTTGAGCATAAGATGATACTAAAGGAGGAGTATGGGATTGAGCCCTGGACTTTTGTTCAGAAGCTAGGAGATGCTGTTTTCATTCCCACTGGCTGTCCTCACCAAGTCAGAAATTTAAAGTCATGCACTAAGGTTGCGCTCGATTTTGTCTCTCCTGAAAACCTTGGCGAGTGTTTCCGTTTAGCAGAGGAATTCCGCACACTTCCAATAAATCACAAGTCTTCCGAGGACAAACTAGAGGTGAAGAAAATGATAGTACATGCTATGGATAATGTGGTTAAAAATTTGTATAAAATAAGGTATGGGGAAACCAAGGTTTCCCTGGAAAATGTATCTGTAACAGATTGA 2511 0.4026 MDELRSKIKVDNDAAQEHKSKHNHVDEKDDFFKQKVGRKRKTFNKDEEVSDGESQMPSQSTTQRRSLRNAHRPSNKNEIPKVKRTVKFTEEECLMCHQCQRNDKGEVVRCRSCKRKRYCLFCLKNWYPEWKNDDVAEACPVCRGNCNCKACLRSDELIKKMKKEVEEKRYGGNEVELSKYMLIRILPYVRQLNEEQMIELGIEAKRQGLSLSELNIEKAEYSQMERVYCDNCKTSIFDYHRSCRKCSFDLCLTCCHELRDGQLLGGADPVELEFIKCSPEYLHGVKEKKKESEIHELPADAEPKNRGWSRSEWRAESDGSIPCPKVNDECCHSFLELKSIFGQAFISELVYKAEELAKAYKLEDTIETPDNWCSCPKISRNPDVRNNMRKAASREDSSDNWLYCPIAEDSRSFDLKHFQWHWNKGEPVIVSNVLECTSGLSWEPLVMWRAFRQITNTKHGQHLDVKVIDCLDWCEGEINIHQFFTGYTNGRYDWLNWPQILKLKDWPPSNLFEERLPRHCAEFISSLPYKEYTDPLKGALNLAVKLPRKCLKPDMGPKTYVAYGVAQELGRGNSVTKLHCDMSDAVNVLTHISKVELEHKNLVAIDKLKLKHLEQDKRELIRDDQEGETNIGVLSNSSSTVDGLSYGPELKDVENVKMNQENSMSIAEDASDGALWDIFRRQDVPKLQEYLKKHFREFRHVHCRPLNQVIHPIHDQTMYLTFEHKMILKEEYGIEPWTFVQKLGDAVFIPTGCPHQVRNLKSCTKVALDFVSPENLGECFRLAEEFRTLPINHKSSEDKLEVKKMIVHAMDNVVKNLYKIRYGETKVSLENVSVTD* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0627 836 MobiDBLite consensus disorder prediction 1 52 - -
Lan8g0627 836 Coils Coil 1 21 - -
Lan8g0627 836 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 90 163 IPR018866 -
Lan8g0627 836 MobiDBLite consensus disorder prediction 53 68 - -
Lan8g0627 836 SMART cupin_9 516 787 IPR003347 -
Lan8g0627 836 ProSiteProfiles Zinc finger RING-type profile. 93 143 IPR001841 -
Lan8g0627 836 PANTHER - 23 815 - -
Lan8g0627 836 SUPERFAMILY Clavaminate synthase-like 403 811 - -
Lan8g0627 836 Gene3D Cupin 399 796 - -
Lan8g0627 836 ProSiteProfiles JmjC domain profile. 535 787 IPR003347 -
Lan8g0627 836 Pfam JmjC domain, hydroxylase 673 770 IPR003347 -
Lan8g0627 836 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 23 815 IPR045109 GO:0032454|GO:0033169
Lan8g0627 836 MobiDBLite consensus disorder prediction 1 81 - -
Lan8g0627 836 Coils Coil 650 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0627 Lan-Chr8 8535860 8541605 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lan8g0627 JmjC 4.4e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0627 K15601 - gmx:100805723 1122.07