Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0624 ATGTCGGAAGCACCCGAAACGTCGCCGTATTGGTGTTACCACTGCGAGAAACGCGTCTCCACCGAAACCCTCCCCAACCTCTTCGATCTCATATGCGCCGACTGCAAAAACGGCTTCGTTGAACAAATTCCTCTCCTTAATCATTCTCCATCCCCTCCTTCTTCCGATTCCGATCATTCTCAATTTGCTTCCAACTTTCTCCATGTTCTTCGCCTCATTGCTCAATCCGCGCGTGATCACGACGCGCCTCCCCCTCCTCCTCCTCCGCCTCCTCGTTCTCGCTCTCCTGGTAGCGATTTCCTCAGGATCGAGCTTGGTGGATGGAACGATGATGAGGAAGGCGATGACGATAATGATGATGGAGAAGAAGAAGAAGAAGAGCGGGATCGAAACGGCAATATGGATCTTCATGGAGATGATGAAGATCTGAGGAGGAGTAGGAGGAGGCGAGAGGTTCTTCGTCTTCGAATTAGGGATTTGGCGATGCGAACAAGGAGCATGAGGAATAGGATCTTGGATTGGTCTGATATTCTGTCTGGTCTCGATGATAATTCGATCCAGTTTCGTCTTCAGGTACCGGAATCTGATCGATACGTTGGGAATCCGGAGGATTACGTCGACGCAGCTGAGTACGAGGCGTTGCTGCAGACGCTGGCGGAGACAGATGGTGGTGGGAAGAAGGGAGCACCGCCGGCGGCGAAGTCCGCGGTGGAGGCGTTGCCGATGGTGGAGATCGTGTCAGAGAAGGATGTTCTGGCGTGTGCTATCTGTAAGGATATGGTTGGTGTTGGTGATGCGGCGAAGAGATTGCCGTGTGGGCATCAATACCATGGAGATTGCATTGTTCCTTGGTTGGGTTCAAGAAATTCGTGCCCTATTTGTAGGTTTGAGCTTCCAACTGAAGATAAGGAATATGAACAACAGAGGAAGAATAAGAGGGTGATGAATAGTTCTTCAAATGGAGCTTCCGGTTCGGGTGGTGGATCGGGTTGA 993 0.5126 MSEAPETSPYWCYHCEKRVSTETLPNLFDLICADCKNGFVEQIPLLNHSPSPPSSDSDHSQFASNFLHVLRLIAQSARDHDAPPPPPPPPPRSRSPGSDFLRIELGGWNDDEEGDDDNDDGEEEEEERDRNGNMDLHGDDEDLRRSRRRREVLRLRIRDLAMRTRSMRNRILDWSDILSGLDDNSIQFRLQVPESDRYVGNPEDYVDAAEYEALLQTLAETDGGGKKGAPPAAKSAVEALPMVEIVSEKDVLACAICKDMVGVGDAAKRLPCGHQYHGDCIVPWLGSRNSCPICRFELPTEDKEYEQQRKNKRVMNSSSNGASGSGGGSG* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0624 330 MobiDBLite consensus disorder prediction 312 330 - -
Lan8g0624 330 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 25 328 - -
Lan8g0624 330 SMART ring_2 254 294 IPR001841 -
Lan8g0624 330 Pfam Ring finger domain 253 295 IPR001841 -
Lan8g0624 330 MobiDBLite consensus disorder prediction 305 330 - -
Lan8g0624 330 Pfam zinc-ribbon 9 43 IPR039525 GO:0061630
Lan8g0624 330 ProSiteProfiles Zinc finger RING-type profile. 254 295 IPR001841 -
Lan8g0624 330 MobiDBLite consensus disorder prediction 109 129 - -
Lan8g0624 330 MobiDBLite consensus disorder prediction 80 95 - -
Lan8g0624 330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 221 301 IPR013083 -
Lan8g0624 330 SUPERFAMILY RING/U-box 248 301 - -
Lan8g0624 330 MobiDBLite consensus disorder prediction 78 143 - -
Lan8g0624 330 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 25 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0624 Lan-Chr8 8527199 8528582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0624 165 311 C3H Transcription Factor Family AT5G01980 43.871 8.51e-34 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0624 - - lang:109346529 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0624 8 8527199 8528582 Lan4g1616 4 25100698 25101976 LSH