Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0607 ATGGTGAACATGATGGAATGGCAGAAACAGTTGCAGAGTTTGCAGAAAAATGGAGAAATGATGTATGTTAAGGTGATGACAGATGAACAATTGGAAACTCTAAGGAAACAGATTGCAGTTTATGCCATCATCTCTGAACAACTTATTCAGATGCATTCTACACTTTCAGCTCACCATGATCTTGCAGGGGTTAGGCTAGGAAACATGTACTGTGATCCATTGATAACATCTTCTGGCCACAAAATAACATCAAGACAAAGATGGACACCTACACCAATGCAACTTCAGATTCTTGAACGTATATTTGATGAAGGGAATGGTACTCCAAGCAAGGAAAAAATCAAGGACATTACTACTGAACTAAGCCAACATGGTCAAATTTCTGAAACAAATGTCTATAATTGGTTCCAGAATAGGCGTGCTAGATCAAAAAGAAAACTACAGAATGTGGCACCTGAATCAGAATTAGAGACTGAGGTTGATTCTAAGGATAAAAAATCAAAGCCAGAGGAAATTCAGTCACAACATATTGTAACTGAAAAGTTGTGCTTCCAAAATCCTGAAATATGCTCTGATTTGCACTACTTGAATACAGATTCTAATAAACCAGATTGCATGGTTCCATCAGATAGATACACAGGAAATTTCAACCGTGTGTCTCTTTATAATGAGGTGCTTTCAAACTCAAGAAGTGATTATCTAGATGGAAAAATAGATCTACCTGAGAGCTACAATTTATACCAGCAAGGAGGAGACTACATTTAG 765 0.3712 MVNMMEWQKQLQSLQKNGEMMYVKVMTDEQLETLRKQIAVYAIISEQLIQMHSTLSAHHDLAGVRLGNMYCDPLITSSGHKITSRQRWTPTPMQLQILERIFDEGNGTPSKEKIKDITTELSQHGQISETNVYNWFQNRRARSKRKLQNVAPESELETEVDSKDKKSKPEEIQSQHIVTEKLCFQNPEICSDLHYLNTDSNKPDCMVPSDRYTGNFNRVSLYNEVLSNSRSDYLDGKIDLPESYNLYQQGGDYI* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0607 254 MobiDBLite consensus disorder prediction 144 172 - -
Lan8g0607 254 Pfam Homeodomain 85 145 IPR001356 GO:0003677
Lan8g0607 254 PANTHER WUSCHEL-RELATED HOMEOBOX 13 3 253 IPR044559 GO:0003700
Lan8g0607 254 MobiDBLite consensus disorder prediction 146 172 - -
Lan8g0607 254 SUPERFAMILY Homeodomain-like 83 147 IPR009057 -
Lan8g0607 254 CDD homeodomain 85 146 IPR001356 GO:0003677
Lan8g0607 254 ProSiteProfiles 'Homeobox' domain profile. 81 146 IPR001356 GO:0003677
Lan8g0607 254 SMART HOX_1 83 150 IPR001356 GO:0003677
Lan8g0607 254 Gene3D - 87 151 - -
Lan8g0607 254 PANTHER - 3 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0607 Lan-Chr8 8267184 8269766 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0607 4 253 Wox Gene Family AT4G35550 50.515 9.11e-83 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lan8g0607 Homeodomain 1.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0607 - - pvu:PHAVU_007G011600g 362.844