Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0605 ATGGCAGTTTATAGAATTGCAATTGGATCTCCAAGAGAAGCTAGCCACCCTGCTGCAATTAGAGCAGCATTTGCAGAGTTCTTTTCAATGCTCATTTTTGTTTTTGCTGGCCAAGGCTCTGGAATGGCTTACACCAAACTTACCAACAATGGACCTGCAACTCCTGATGGTCTCATAGTTGCATCATTATCTCATGCATTTGGGCTATTTGTGGCTGTTTCTGTTGGGGCTAACATTTCTGGTGGCCATGTGAACCCTGCAGTCACATTTGGTGCATTTGTAGGAGGAAACATAACACTATTAAGAAGTATTTTGTATTGGATTGCACAGTTGTTTGGCTCAGTTGTTGCTTGCATTCTTCTCAATTTTGCCACTGGTGGAATGGAAACAACAGCTTTCTCTCTATCATCTGGTGTGTCTGTATGGAATGCACTTGTTTTTGAAATTGTGATGACTTTTGGGTTGGTATATACAGTTTATGCAACAGCAGTAGACCCAAAAAAGGGTAATATTGGTGTTGTTGCTCCAATAGCAATTGGTTTGATTGTAGGTGCTAACATTTTGGTTGGTGGTGCATTTGATGGGGCATCAATGAACCCAGCTGTGTCATTTGGTCCTGCTTTAGTTAGTTGGTCATGGACTCATCATTGGGTTTATTGGCTTGGCCCATTCATTGGTTCAGCAGCTGCAGCTATTATTTATGATAATATCTTTATTGGCGATGATGCTCATCAACCCCTTTCAAATACTGACTTCTAG 759 0.4124 MAVYRIAIGSPREASHPAAIRAAFAEFFSMLIFVFAGQGSGMAYTKLTNNGPATPDGLIVASLSHAFGLFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRSILYWIAQLFGSVVACILLNFATGGMETTAFSLSSGVSVWNALVFEIVMTFGLVYTVYATAVDPKKGNIGVVAPIAIGLIVGANILVGGAFDGASMNPAVSFGPALVSWSWTHHWVYWLGPFIGSAAAAIIYDNIFIGDDAHQPLSNTDF* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0605 252 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g0605 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g0605 252 PANTHER AQUAPORIN-8 1 251 IPR034294 -
Lan8g0605 252 SUPERFAMILY Aquaporin-like 13 240 IPR023271 -
Lan8g0605 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g0605 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g0605 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g0605 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g0605 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g0605 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g0605 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Lan8g0605 252 PANTHER AQUAPORIN TIP1-1 1 251 - -
Lan8g0605 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0605 Lan-Chr8 8256988 8258545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0605 1 252 Major Intrinsic Protein MIP AT4G01470 80.952 1.48e-148 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0605 K09873 - gmx:100818197 465.692