Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0598 ATGGCGAGGATCAAGGTTTACGAGTTGAGGCAAAAGACCAAAGCTGATTTGTTAAGCCAGCTTAAGGATCTCAAGGCTGAGCTTGCTTTGCTCCGTGTTGCTAAGGTCACTGGTGGTGCACCTAACAAGCTCTCCAAGATCAAAGTGGTGAGGTTGAACATTGCACAGGTTTTGACCGTGATTTCTCAGAAGCAGAAATCTGCATTGAGGGAAGCTTATAAGAACAAGAAATACTTGCCTCTTGATCTGCGCCCAAAGAAGACTAGGGCTATTCGTAGAAGGCTTACCAAGCACCAGCAATCATTGAAGACGGAGCGGGAGAAGAAGAGAGAAACATATTTCCCATTGAGGAAATTTGCTATCAAGGTGTAA 372 0.4489 MARIKVYELRQKTKADLLSQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLNIAQVLTVISQKQKSALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQQSLKTEREKKRETYFPLRKFAIKV* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0598 123 PANTHER 60S RIBOSOMAL PROTEIN L35 1 123 IPR045059 GO:0000463|GO:0022625
Lan8g0598 123 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lan8g0598 123 TIGRFAM L29: ribosomal protein uL29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lan8g0598 123 Gene3D - 78 123 - -
Lan8g0598 123 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 1 123 - -
Lan8g0598 123 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Lan8g0598 123 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lan8g0598 123 CDD Ribosomal_L29_HIP 8 64 - -
Lan8g0598 123 Coils Coil 7 34 - -
Lan8g0598 123 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0598 Lan-Chr8 8223064 8224706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0598 1 123 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 87.805 1.57e-72 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0598 K02918 - gmx:100801539 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0598 8 8223064 8224706 Lan20g1027 20 11073079 11074905 LSH
Lan8g0598 8 8223064 8224706 Lan4g1597 4 24973487 24977816 LSH