Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0547 ATGTATTCCTACATCTTCTCCCTACTGTTATTACCAATCATATTTCTCAACCATACTGCAATAGCACACATCTATTCCCCTTCATTACCATTCCCTCACTGTTCAACCAACAACACTTATGCACCAAATAGCACTTATGACACCAACCTTAAAACTCTTCTATCATGGCTTTCCTCTAATGCAACACACACAATCCAAATTTACAACACCACCATTGCAGAAAGCAACACACTTTCCAACACCATCTATGGCCTTTTCATGTGTAGAATTGGAGATGCTGTCCCTGATTGTAGAGACTGTGTTATAAACTCAACCAAGGTGATAACAAAACTATGCCCCATGTCTAAAGAAGCTATAATTTGGAGTGATAATTGCTTCATGCGTTACTCAGATCATTATTTCTTTACAACAGTGGAAGAGAGTCCTAAACATTGTGCCATGAATGAGAATGACTATGTAGGACAAGTAGAACATTTCAATAGCATACTTTGGGATACATTGAATGCTGTGAGAAATCTTACAGCAAATCCTTCTTTTGGAACTATGAAGTATGGTTACAAGTCAGTGGATATCACTGCTAACCAAACACTATATGCAATGGGATATTGCATTCCATACCTTTCTTCAGAAAACTGTAGTTTGTGTCTCAGTGATGCTATAGCAGAAATTCCAACATCTTGTTGTAAAGGAAAAACTGGAGGAAGGGTTATTTACCCAAGTTGTGGTATTAGATTTGAATCATATCCATTTTATCAACTTCCTTCAGGGTCACTACTTACTCCTACTCCTAAATTGGGTCCTTTTGCCTCTTTGCCATTCCCAGGGAAAAGAAAACATTCTGTAACGGTAACCGCGGTGGTTGTACCAATTATTTTATTGGTGGTGGTTTTATGTTTGGCTTGCAGCTGGTTTCTCAGCAGAAGACAGAGGAAGAGTCATGAGGCTATTCTCAAAGAAAGCTTTGGAAATGAAGTAACAACTTTGGAGTCCTTGTGGTTCGATTTAAGTGAAATAGAGTCTGCAACAAACAAGTTTGCTAAAGAAAATATGATTGGAAAAGGTGGATTTGGAGAAGTTTATAAGGGTGTTCTTTCCAATGGGAAGGAGATCGCTGTGAAGAGACTTTTGAGAAATTCTCAGCAAGGGGCAAGAGAATTTAAGAATGAGGTTCTTGCCATAGCTCAACTTCAACACAGAAATCTAGTGAAATTACAAGGATTTTGTCTGGATGGAAAAGAAAAGATGCTAGTATATGAATATGTACCCAACAAGAGCCTTGATTACTTTTTATTTGATCCCCAAAAGAGAAGAGAATTAAATTGGTGTGAAAGGTACAAGATTATCGGAGGAATTGCTCGAGGAATTCTTTATCTCCACGAGGATTCTCGTCTTAAAATTATACATCGTGATCTCAAACCTAGTAATATTTTGCTAGACGGTGACATGAATCCAAAAATCTCAGATTTTGGAATGGCAAGGATTGTTGCTGCTGATAATATTGCAGAAAACACACAGAGAATTGTTGGAACATACGGTTACATGTCTCCAGAATATGTAATGCGTGGCCAATTTTCGGTGAAGTCTGATGTGTTTAGTTTTGGTATCATGTTGCTAGAGATTATCAGTGGAAAAAGGAAAGGTTTTTCTTCTGAATCAGAACATGTAGATGGCATAAGAAAATATGCTCAAACAAAATGGAGATGTGAAACACCATTGGAACTCTTAGATCCTAAATTGGAAGGATGTTATTCTGAAAGTGAAGTCATTAAATGCATTCAGATTGGTTTATTATGTGTAGAAGAAGACCACAATGATAGACCCACAATGGCAAAAGTTGTCTCCTACTTAAACAGTTCTTCACTTGATTTGCCATTACCAACTGAACAACCATTTTTCATTAATGGAAAAGAGGAAGAAATTATGTCTAGAAAAATGTTGGAATCTGCTACCTATTCACACTATGAATCTAGAAATGAAATGACAATTGAATTTTACCCACGATAA 2004 0.3693 MYSYIFSLLLLPIIFLNHTAIAHIYSPSLPFPHCSTNNTYAPNSTYDTNLKTLLSWLSSNATHTIQIYNTTIAESNTLSNTIYGLFMCRIGDAVPDCRDCVINSTKVITKLCPMSKEAIIWSDNCFMRYSDHYFFTTVEESPKHCAMNENDYVGQVEHFNSILWDTLNAVRNLTANPSFGTMKYGYKSVDITANQTLYAMGYCIPYLSSENCSLCLSDAIAEIPTSCCKGKTGGRVIYPSCGIRFESYPFYQLPSGSLLTPTPKLGPFASLPFPGKRKHSVTVTAVVVPIILLVVVLCLACSWFLSRRQRKSHEAILKESFGNEVTTLESLWFDLSEIESATNKFAKENMIGKGGFGEVYKGVLSNGKEIAVKRLLRNSQQGAREFKNEVLAIAQLQHRNLVKLQGFCLDGKEKMLVYEYVPNKSLDYFLFDPQKRRELNWCERYKIIGGIARGILYLHEDSRLKIIHRDLKPSNILLDGDMNPKISDFGMARIVAADNIAENTQRIVGTYGYMSPEYVMRGQFSVKSDVFSFGIMLLEIISGKRKGFSSESEHVDGIRKYAQTKWRCETPLELLDPKLEGCYSESEVIKCIQIGLLCVEEDHNDRPTMAKVVSYLNSSSLDLPLPTEQPFFINGKEEEIMSRKMLESATYSHYESRNEMTIEFYPR* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0547 667 ProSiteProfiles Protein kinase domain profile. 345 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0547 667 Gene3D Phosphorylase Kinase; domain 1 305 420 - -
Lan8g0547 667 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Lan8g0547 667 ProSiteProfiles Gnk2-homologous domain profile. 28 134 IPR002902 -
Lan8g0547 667 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 24 667 - -
Lan8g0547 667 Pfam Protein kinase domain 346 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0547 667 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 24 667 - -
Lan8g0547 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Lan8g0547 667 Pfam Salt stress response/antifungal 145 248 IPR002902 -
Lan8g0547 667 Pfam Salt stress response/antifungal 34 131 IPR002902 -
Lan8g0547 667 SMART serkin_6 345 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0547 667 Gene3D - 29 134 IPR038408 -
Lan8g0547 667 Gene3D - 142 250 IPR038408 -
Lan8g0547 667 Gene3D Transferase(Phosphotransferase) domain 1 421 623 - -
Lan8g0547 667 CDD STKc_IRAK 351 617 - -
Lan8g0547 667 SUPERFAMILY Protein kinase-like (PK-like) 330 647 IPR011009 -
Lan8g0547 667 ProSiteProfiles Gnk2-homologous domain profile. 140 250 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0547 Lan-Chr8 7684719 7687643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0547 5 633 Receptor kinase-like Gene Family AT4G05200 45.055 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan8g0547 Pkinase 8.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0547 - - gmx:100793219 726.472