Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0543 ATGATATTGATAATCACTAAGATGCTTCTCTTCTACATCAACCATGTTGTGACCCCATTTCTTCTCCTATCTCTGCTATTTGTATCATTTACCTCATCAACTCCTACTTATAACGGTATATACTGTCCAAACAACATTACCTACGAAACCAACAACAACACTGTCTTCCAAACCAATCTCAAAGTTCTTCTCTCTTCTCTCCTCTCTAACGCCACCCAAGGCAGCAGCTCCTACACCACCGCCATGGGTATGGGCAACTCCAACGCCGTCAACGGTGTTTACCTCTGCCGTGGCGACGTCTCCACCGCAACATGTACGGAGTGCATGGTCACCGCGGTCGCAAACATAACAACCCTTTGCCCAAACAAGACTGAGTCGATAATATGGTACGATGAATGCATGTTGCGTTACACAAACACTTACTTCAACCCTTTGAGCATCGACCCAAGATTGAACTTGTGGGAAAACGAAAGCATATCTACGTCGGATTTAGATAAGTTCAACGAAACGCTTTTAAGCTTTTTGGGGAGTTTGGGTTCAGACGCTGCGAATTCTGAGACAGCGATGAAATATTCGACCAAAGAATGGGACTTCACGGAGGAGATAAGGGTGTTTGGATTGGCGGAGTGTGCTCCCGGCGTGACGAGTGAACAGTGTGAAGGGTGTTTGGTAAATGCGAGTAAGACTCTTGTGACGTGTTGTGAAGGAAAAGAAGGTGCACGAGCTTTGCTTGCATGGTGTAATATTAGATATGATTTGTTCCAATTTTACAATACAAGTGGAACATCTATATCCCCACCTTTTCTTTCTCCTCCTCCTCCTTCAGGAAAGAAGAAATATGACACAAAAACAATTGTGATCATTGTTGTCCTTGTTGTCTTTTCAATCATTCTCATTTGTTTGGGCTGCTGTTTCCTATTGAGAAGAAGATTAAGGAAGAAATATAAAACTCTTCTAAAAGAAAATTTTGGAGATGAAGGTGCTGCTTTGGAATCATTACAATTTAATTTAGCAACAATTGAGGTTGCAACAAAAAAGTTTTCAAATGAAAACAAAATAGGCAAGGGAGGATTTGGAGAAGTGTACAAGGGTATTCTTTCAAATGGACGAGAAATAGCTGTAAAAAAACTCTCTCAAAGTTCAGGACAAGGTGCAATTGAATTCAAGAATGAGGTTTTATTGATAGCCAAACTTCAACACAGAAACCTAGTGACATTATTAGGATTTTGCTTGGATGAACAAGAGAAAATGCTCATTTATGAATATGTGCCTAATGAAAGCCTTGATTACTTTCTATTTGGTTCTCACGAGAGCAGATTATTGAATTGGTTGGAGCGTTACAATATTATTAAAGGGATTGCACAAGGAATTCATTATCTACATGACCATTCGAGGTTGAAAATTATACATCGTGATCTCAAAGCAAGCAATGTGTTGTTAGATAGCAACATGAATCCAAAGATATCAGACTTTGGCATGGCAAGAATAATTGCTTTAGATGAAGATCGAGGAAGTACATGTAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATGCAATGCATGGACAATTTTCAGAAAAATCAGATGTATTTAGTTTTGGAGTCATACTTCTGGAGATAATTAGTGCAAAACGGAATGCACGTTCTATTTTTTCAGATGATTTGGATGACCTCTTGAGTTATGCTTGGAAACAATGGAGGGATGAAACACCATTAAAAATATTAGACCAAGATATTAAAGAATGTTGCAATGATAGTGAAGTCATTAAGTGCATCCAAATTGGTTTATTATGTGTCCAAGATAGACCAGATGATAGACCTACTATGGCCAAAATTGTTTCTTATTTCAGTAGCACTCATTCTGAAGTTGAGTTGCCATTTCCAGGAGAACCAATCAATTCTATGCATAATCAAATATTGCAAAAGATTGTAGTAGATGACTCAAGTTCAGGTTCTAAACAACTCAATGAATTGTCTATGCCTAGGTAG 1995 0.385 MILIITKMLLFYINHVVTPFLLLSLLFVSFTSSTPTYNGIYCPNNITYETNNNTVFQTNLKVLLSSLLSNATQGSSSYTTAMGMGNSNAVNGVYLCRGDVSTATCTECMVTAVANITTLCPNKTESIIWYDECMLRYTNTYFNPLSIDPRLNLWENESISTSDLDKFNETLLSFLGSLGSDAANSETAMKYSTKEWDFTEEIRVFGLAECAPGVTSEQCEGCLVNASKTLVTCCEGKEGARALLAWCNIRYDLFQFYNTSGTSISPPFLSPPPPSGKKKYDTKTIVIIVVLVVFSIILICLGCCFLLRRRLRKKYKTLLKENFGDEGAALESLQFNLATIEVATKKFSNENKIGKGGFGEVYKGILSNGREIAVKKLSQSSGQGAIEFKNEVLLIAKLQHRNLVTLLGFCLDEQEKMLIYEYVPNESLDYFLFGSHESRLLNWLERYNIIKGIAQGIHYLHDHSRLKIIHRDLKASNVLLDSNMNPKISDFGMARIIALDEDRGSTCRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVILLEIISAKRNARSIFSDDLDDLLSYAWKQWRDETPLKILDQDIKECCNDSEVIKCIQIGLLCVQDRPDDRPTMAKIVSYFSSTHSEVELPFPGEPINSMHNQILQKIVVDDSSSGSKQLNELSMPR* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0543 664 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 17 644 - -
Lan8g0543 664 ProSitePatterns Protein kinases ATP-binding region signature. 353 376 IPR017441 GO:0005524
Lan8g0543 664 ProSiteProfiles Protein kinase domain profile. 347 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0543 664 CDD STKc_IRAK 353 618 - -
Lan8g0543 664 ProSiteProfiles Gnk2-homologous domain profile. 36 142 IPR002902 -
Lan8g0543 664 Pfam Protein tyrosine and serine/threonine kinase 349 617 IPR001245 GO:0004672|GO:0006468
Lan8g0543 664 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 644 - -
Lan8g0543 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Lan8g0543 664 Gene3D - 151 256 IPR038408 -
Lan8g0543 664 Gene3D - 38 142 IPR038408 -
Lan8g0543 664 Gene3D Phosphorylase Kinase; domain 1 311 422 - -
Lan8g0543 664 SMART serkin_6 347 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0543 664 ProSiteProfiles Gnk2-homologous domain profile. 147 256 IPR002902 -
Lan8g0543 664 SUPERFAMILY Protein kinase-like (PK-like) 332 645 IPR011009 -
Lan8g0543 664 Pfam Salt stress response/antifungal 42 139 IPR002902 -
Lan8g0543 664 Pfam Salt stress response/antifungal 163 252 IPR002902 -
Lan8g0543 664 Gene3D Transferase(Phosphotransferase) domain 1 423 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0543 Lan-Chr8 7660002 7663751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0543 17 630 Receptor kinase-like Gene Family AT4G05200 44.904 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan8g0543 PK_Tyr_Ser-Thr 1.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0543 - - ccaj:109813299 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0543 8 7660002 7663751 Lan4g1531 4 24447436 24448745 LSH